Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224528 |
| length | 786 |
| lncRNA type | sense_over |
| GC content | 0.49 |
| exon number | 4 |
| gene id | pyyb |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 2525056 ~ 2528820 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0043169 | cation binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224401 | lncRNA | upstream | 206749 | 2317318 ~ 2318307 (+) | True | G189570 |
| TU224394 | lncRNA | upstream | 215638 | 2308226 ~ 2309418 (+) | True | G189563 |
| TU224386 | lncRNA | upstream | 229751 | 2295086 ~ 2295305 (+) | True | G189555 |
| TU224296 | lncRNA | upstream | 379300 | 2143152 ~ 2145756 (+) | True | G189477 |
| TU224099 | lncRNA | upstream | 584800 | 1939952 ~ 1940256 (+) | False | LOC117598558 |
| TU224489 | lncRNA | downstream | 62418 | 2591238 ~ 2609497 (+) | True | G189626 |
| TU224549 | lncRNA | downstream | 77063 | 2605883 ~ 2608078 (+) | True | G189678 |
| TU224557 | lncRNA | downstream | 85877 | 2614697 ~ 2615755 (+) | True | G189684 |
| XR_003404829.2 | lncRNA | downstream | 113021 | 2641841 ~ 2644184 (+) | True | LOC113547470 |
| TU224817 | lncRNA | downstream | 345335 | 2874155 ~ 2875297 (+) | True | G189916 |
| XM_034309634.1 | mRNA | upstream | 9802 | 2503394 ~ 2515254 (+) | True | tut1 |
| XM_026947816.2 | mRNA | upstream | 9802 | 2503394 ~ 2515254 (+) | False | tut1 |
| XM_034309326.1 | mRNA | upstream | 22226 | 2489809 ~ 2502830 (+) | True | mki67 |
| XM_034309328.1 | mRNA | upstream | 22226 | 2489809 ~ 2502830 (+) | False | mki67 |
| XM_034309330.1 | mRNA | upstream | 22226 | 2489810 ~ 2502830 (+) | False | mki67 |
| XM_026947871.2 | mRNA | downstream | 2260 | 2531080 ~ 2573684 (+) | False | mpp2b |
| XM_026947872.2 | mRNA | downstream | 2728 | 2531548 ~ 2573684 (+) | False | mpp2b |
| XM_034309412.1 | mRNA | downstream | 14618 | 2543438 ~ 2574774 (+) | True | mpp2b |
| XM_034309413.1 | mRNA | downstream | 14623 | 2543443 ~ 2574774 (+) | False | mpp2b |
| XM_026947869.2 | mRNA | downstream | 19712 | 2548532 ~ 2573684 (+) | False | mpp2b |
| TU223925 | other | upstream | 859719 | 1663092 ~ 1665337 (+) | False | LOC117598477 |
| XR_003403557.2 | other | upstream | 2304688 | 137521 ~ 220368 (+) | False | ccser2b |
| TU224759 | other | downstream | 231873 | 2760693 ~ 2761010 (+) | True | G189864 |
| TU224820 | other | downstream | 441305 | 2970125 ~ 2989928 (+) | False | LOC113547538 |
| TU224822 | other | downstream | 441305 | 2970125 ~ 3021609 (+) | False | LOC113547538 |
| TU224959 | other | downstream | 709624 | 3238444 ~ 3239216 (+) | True | G190028 |
| TU225191 | other | downstream | 872447 | 3401267 ~ 3405009 (+) | True | G190212 |
