Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224599 |
| length | 622 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G189717 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 2603193 ~ 2604096 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224575 | lncRNA | downstream | 203717 | 2394026 ~ 2399476 (-) | True | G189702 |
| TU224375 | lncRNA | downstream | 322440 | 2280546 ~ 2280753 (-) | True | G189547 |
| TU224340 | lncRNA | downstream | 440622 | 2160630 ~ 2162571 (-) | True | G189521 |
| TU224331 | lncRNA | downstream | 456278 | 2146712 ~ 2146915 (-) | True | G189512 |
| TU224263 | lncRNA | downstream | 541928 | 2048830 ~ 2061265 (-) | False | G189451 |
| TU224700 | lncRNA | upstream | 51260 | 2655303 ~ 2655507 (-) | True | G189810 |
| TU224750 | lncRNA | upstream | 90737 | 2694780 ~ 2701420 (-) | True | G189855 |
| TU224782 | lncRNA | upstream | 188784 | 2792827 ~ 2802964 (-) | True | G189885 |
| TU224779 | lncRNA | upstream | 192464 | 2796507 ~ 2827807 (-) | True | G189882 |
| TU224787 | lncRNA | upstream | 194197 | 2798240 ~ 2798669 (-) | False | LOC113547504 |
| XM_034309571.1 | mRNA | downstream | 2660 | 2591412 ~ 2600533 (-) | True | smarcd2 |
| XM_026947813.2 | mRNA | downstream | 13048 | 2583781 ~ 2590145 (-) | False | psmc5 |
| XM_034309575.1 | mRNA | upstream | 1990 | 2606033 ~ 2615766 (-) | False | si:dkeyp-118b1.2 |
| XM_034309574.1 | mRNA | upstream | 1990 | 2606033 ~ 2615765 (-) | True | si:dkeyp-118b1.2 |
| XM_034309577.1 | mRNA | upstream | 1990 | 2606033 ~ 2615760 (-) | False | si:dkeyp-118b1.2 |
| XM_034309576.1 | mRNA | upstream | 1990 | 2606033 ~ 2615760 (-) | False | si:dkeyp-118b1.2 |
| XM_026947875.2 | mRNA | upstream | 14346 | 2618389 ~ 2638273 (-) | True | slc4a1b |
| XR_003404831.2 | other | downstream | 392214 | 2194987 ~ 2210979 (-) | False | LOC113547489 |
| TU223956 | other | downstream | 1032120 | 1568286 ~ 1571073 (-) | True | G189199 |
| TU223922 | other | downstream | 1037933 | 1564890 ~ 1565260 (-) | True | G189180 |
| TU224780 | other | upstream | 189003 | 2793046 ~ 2814580 (-) | False | LOC117598559 |
| TU224784 | other | upstream | 196033 | 2800076 ~ 2805906 (-) | False | LOC113547504 |
| TU224811 | other | upstream | 248012 | 2852055 ~ 2855493 (-) | True | ndufa4 |
| trnap-cgg_2 | other | upstream | 2294731 | 4898774 ~ 4898845 (-) | True | trnap-cgg_2 |
| trnap-agg_2 | other | upstream | 2295923 | 4899966 ~ 4900037 (-) | True | trnap-agg_2 |
