Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224700 |
| length | 205 |
| lncRNA type | inter_gene |
| GC content | 0.61 |
| exon number | 1 |
| gene id | G189810 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 2655303 ~ 2655507 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224592 | lncRNA | downstream | 45530 | 2591237 ~ 2609773 (-) | False | smarcd2 |
| TU224598 | lncRNA | downstream | 51207 | 2603193 ~ 2604096 (-) | True | G189717 |
| TU224599 | lncRNA | downstream | 51260 | 2603193 ~ 2604043 (-) | False | G189717 |
| TU224575 | lncRNA | downstream | 255827 | 2394026 ~ 2399476 (-) | True | G189702 |
| TU224375 | lncRNA | downstream | 374550 | 2280546 ~ 2280753 (-) | True | G189547 |
| TU224750 | lncRNA | upstream | 39273 | 2694780 ~ 2701420 (-) | True | G189855 |
| TU224782 | lncRNA | upstream | 137320 | 2792827 ~ 2802964 (-) | True | G189885 |
| TU224779 | lncRNA | upstream | 141000 | 2796507 ~ 2827807 (-) | True | G189882 |
| TU224787 | lncRNA | upstream | 142733 | 2798240 ~ 2798669 (-) | False | LOC113547504 |
| TU224786 | lncRNA | upstream | 151094 | 2806601 ~ 2809919 (-) | False | LOC113547504 |
| XM_026947875.2 | mRNA | downstream | 17030 | 2618389 ~ 2638273 (-) | True | slc4a1b |
| XM_034309575.1 | mRNA | downstream | 39537 | 2606033 ~ 2615766 (-) | False | si:dkeyp-118b1.2 |
| XM_034309574.1 | mRNA | downstream | 39538 | 2606033 ~ 2615765 (-) | True | si:dkeyp-118b1.2 |
| XM_034309577.1 | mRNA | downstream | 39543 | 2606033 ~ 2615760 (-) | False | si:dkeyp-118b1.2 |
| XM_034309576.1 | mRNA | downstream | 39543 | 2606033 ~ 2615760 (-) | False | si:dkeyp-118b1.2 |
| XM_026947878.2 | mRNA | upstream | 76709 | 2732216 ~ 2745395 (-) | True | LOC113547505 |
| XM_034309629.1 | mRNA | upstream | 130574 | 2786081 ~ 2811391 (-) | True | LOC113547504 |
| XM_034309351.1 | mRNA | upstream | 157859 | 2813366 ~ 2827752 (-) | True | LOC117598559 |
| XM_026947900.2 | mRNA | upstream | 196548 | 2852055 ~ 2855362 (-) | False | ndufa4 |
| XM_026947848.2 | mRNA | upstream | 200729 | 2856236 ~ 2864989 (-) | True | rundc3ab |
| XR_003404831.2 | other | downstream | 444324 | 2194987 ~ 2210979 (-) | False | LOC113547489 |
| TU223956 | other | downstream | 1084230 | 1568286 ~ 1571073 (-) | True | G189199 |
| TU223922 | other | downstream | 1090043 | 1564890 ~ 1565260 (-) | True | G189180 |
| TU224780 | other | upstream | 137539 | 2793046 ~ 2814580 (-) | False | LOC117598559 |
| TU224784 | other | upstream | 144569 | 2800076 ~ 2805906 (-) | False | LOC113547504 |
| TU224811 | other | upstream | 196548 | 2852055 ~ 2855493 (-) | True | ndufa4 |
| trnap-cgg_2 | other | upstream | 2243267 | 4898774 ~ 4898845 (-) | True | trnap-cgg_2 |
| trnap-agg_2 | other | upstream | 2244459 | 4899966 ~ 4900037 (-) | True | trnap-agg_2 |
