Item | Value |
---|---|
RNA id | TU224782 |
length | 239 |
lncRNA type | sense_over |
GC content | 0.50 |
exon number | 3 |
gene id | G189885 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047606.1 |
NCBI id | CM018552.1 |
chromosome length | 26563515 |
location | 2792827 ~ 2802964 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | name | namespace |
---|---|---|
GO:0002376 | immune system process | biological_process |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU224750 | lncRNA | downstream | 91407 | 2694780 ~ 2701420 (-) | True | G189855 |
TU224700 | lncRNA | downstream | 137320 | 2655303 ~ 2655507 (-) | True | G189810 |
TU224592 | lncRNA | downstream | 183054 | 2591237 ~ 2609773 (-) | False | smarcd2 |
TU224598 | lncRNA | downstream | 188731 | 2603193 ~ 2604096 (-) | True | G189717 |
TU224599 | lncRNA | downstream | 188784 | 2603193 ~ 2604043 (-) | False | G189717 |
TU224786 | lncRNA | upstream | 3637 | 2806601 ~ 2809919 (-) | False | LOC113547504 |
TU224982 | lncRNA | upstream | 108048 | 2911012 ~ 2911255 (-) | True | G190048 |
TU225014 | lncRNA | upstream | 274067 | 3077031 ~ 3077290 (-) | True | G190076 |
TU225033 | lncRNA | upstream | 352947 | 3155911 ~ 3156150 (-) | True | G190094 |
TU225036 | lncRNA | upstream | 367919 | 3170883 ~ 3171571 (-) | True | G190097 |
XM_026947878.2 | mRNA | downstream | 47432 | 2732216 ~ 2745395 (-) | True | LOC113547505 |
XM_026947875.2 | mRNA | downstream | 154554 | 2618389 ~ 2638273 (-) | True | slc4a1b |
XM_034309575.1 | mRNA | downstream | 177061 | 2606033 ~ 2615766 (-) | False | si:dkeyp-118b1.2 |
XM_034309351.1 | mRNA | upstream | 10402 | 2813366 ~ 2827752 (-) | True | LOC117598559 |
XM_026947900.2 | mRNA | upstream | 49091 | 2852055 ~ 2855362 (-) | False | ndufa4 |
XM_026947848.2 | mRNA | upstream | 53272 | 2856236 ~ 2864989 (-) | True | rundc3ab |
XM_026947845.2 | mRNA | upstream | 71552 | 2874516 ~ 2896348 (-) | True | pth3r |
XM_026947856.2 | mRNA | upstream | 121631 | 2924595 ~ 2952904 (-) | True | erbb2 |
XR_003404831.2 | other | downstream | 581848 | 2194987 ~ 2210979 (-) | False | LOC113547489 |
TU223956 | other | downstream | 1221754 | 1568286 ~ 1571073 (-) | True | G189199 |
TU223922 | other | downstream | 1227567 | 1564890 ~ 1565260 (-) | True | G189180 |
TU224811 | other | upstream | 49091 | 2852055 ~ 2855493 (-) | True | ndufa4 |
trnap-cgg_2 | other | upstream | 2095810 | 4898774 ~ 4898845 (-) | True | trnap-cgg_2 |
trnap-agg_2 | other | upstream | 2097002 | 4899966 ~ 4900037 (-) | True | trnap-agg_2 |
trnap-ugg_3 | other | upstream | 2098172 | 4901136 ~ 4901207 (-) | True | trnap-ugg_3 |
trnap-ugg_4 | other | upstream | 2099364 | 4902328 ~ 4902399 (-) | True | trnap-ugg_4 |