Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224786 |
| length | 277 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 4 |
| gene id | LOC113547504 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 2786081 ~ 2811391 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224782 | lncRNA | downstream | 3637 | 2792827 ~ 2802964 (-) | True | G189885 |
| TU224787 | lncRNA | downstream | 7932 | 2798240 ~ 2798669 (-) | False | LOC113547504 |
| TU224750 | lncRNA | downstream | 105181 | 2694780 ~ 2701420 (-) | True | G189855 |
| TU224700 | lncRNA | downstream | 151094 | 2655303 ~ 2655507 (-) | True | G189810 |
| TU224592 | lncRNA | downstream | 196828 | 2591237 ~ 2609773 (-) | False | smarcd2 |
| TU224982 | lncRNA | upstream | 101093 | 2911012 ~ 2911255 (-) | True | G190048 |
| TU225014 | lncRNA | upstream | 267112 | 3077031 ~ 3077290 (-) | True | G190076 |
| TU225033 | lncRNA | upstream | 345992 | 3155911 ~ 3156150 (-) | True | G190094 |
| TU225036 | lncRNA | upstream | 360964 | 3170883 ~ 3171571 (-) | True | G190097 |
| TU225038 | lncRNA | upstream | 363141 | 3173060 ~ 3173967 (-) | True | G190099 |
| XM_026947878.2 | mRNA | downstream | 61206 | 2732216 ~ 2745395 (-) | True | LOC113547505 |
| XM_026947875.2 | mRNA | downstream | 168328 | 2618389 ~ 2638273 (-) | True | slc4a1b |
| XM_034309574.1 | mRNA | downstream | 190836 | 2606033 ~ 2615765 (-) | True | si:dkeyp-118b1.2 |
| XM_034309351.1 | mRNA | upstream | 3447 | 2813366 ~ 2827752 (-) | True | LOC117598559 |
| XM_026947900.2 | mRNA | upstream | 42136 | 2852055 ~ 2855362 (-) | False | ndufa4 |
| XM_026947848.2 | mRNA | upstream | 46317 | 2856236 ~ 2864989 (-) | True | rundc3ab |
| XM_026947845.2 | mRNA | upstream | 64597 | 2874516 ~ 2896348 (-) | True | pth3r |
| XM_026947856.2 | mRNA | upstream | 114676 | 2924595 ~ 2952904 (-) | True | erbb2 |
| TU224784 | other | downstream | 695 | 2800076 ~ 2805906 (-) | False | LOC113547504 |
| XR_003404831.2 | other | downstream | 595622 | 2194987 ~ 2210979 (-) | False | LOC113547489 |
| TU223956 | other | downstream | 1235528 | 1568286 ~ 1571073 (-) | True | G189199 |
| TU223922 | other | downstream | 1241341 | 1564890 ~ 1565260 (-) | True | G189180 |
| TU224811 | other | upstream | 42136 | 2852055 ~ 2855493 (-) | True | ndufa4 |
| trnap-cgg_2 | other | upstream | 2088855 | 4898774 ~ 4898845 (-) | True | trnap-cgg_2 |
| trnap-agg_2 | other | upstream | 2090047 | 4899966 ~ 4900037 (-) | True | trnap-agg_2 |
| trnap-ugg_3 | other | upstream | 2091217 | 4901136 ~ 4901207 (-) | True | trnap-ugg_3 |
| trnap-ugg_4 | other | upstream | 2092409 | 4902328 ~ 4902399 (-) | True | trnap-ugg_4 |
