Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224817 |
| length | 826 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G189916 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 2874155 ~ 2875297 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003404829.2 | lncRNA | upstream | 229971 | 2641841 ~ 2644184 (+) | True | LOC113547470 |
| TU224557 | lncRNA | upstream | 258400 | 2614697 ~ 2615755 (+) | True | G189684 |
| TU224489 | lncRNA | upstream | 264658 | 2591238 ~ 2609497 (+) | True | G189626 |
| TU224549 | lncRNA | upstream | 266077 | 2605883 ~ 2608078 (+) | True | G189678 |
| TU224528 | lncRNA | upstream | 345335 | 2525056 ~ 2528820 (+) | True | pyyb |
| TU224838 | lncRNA | downstream | 49917 | 2925214 ~ 2925571 (+) | True | G189933 |
| TU224839 | lncRNA | downstream | 52504 | 2927801 ~ 2928169 (+) | True | G189934 |
| TU224845 | lncRNA | downstream | 55636 | 2930933 ~ 2931380 (+) | True | G189940 |
| TU224846 | lncRNA | downstream | 59058 | 2934355 ~ 2935400 (+) | True | G189941 |
| TU224851 | lncRNA | downstream | 65933 | 2941230 ~ 2941830 (+) | True | G189946 |
| XM_026947904.2 | mRNA | upstream | 176908 | 2656860 ~ 2697247 (+) | True | ngfrb |
| XM_034309412.1 | mRNA | upstream | 299381 | 2543438 ~ 2574774 (+) | True | mpp2b |
| XM_034309413.1 | mRNA | upstream | 299381 | 2543443 ~ 2574774 (+) | False | mpp2b |
| XM_026947871.2 | mRNA | upstream | 300471 | 2531080 ~ 2573684 (+) | False | mpp2b |
| XM_026947872.2 | mRNA | upstream | 300471 | 2531548 ~ 2573684 (+) | False | mpp2b |
| XM_026947846.2 | mRNA | downstream | 23592 | 2898889 ~ 2906026 (+) | True | LOC113547481 |
| XM_026947842.2 | mRNA | downstream | 30857 | 2906154 ~ 2923348 (+) | True | LOC113547478 |
| XM_034309597.1 | mRNA | downstream | 30857 | 2906154 ~ 2923348 (+) | False | LOC113547478 |
| XM_034309596.1 | mRNA | downstream | 30857 | 2906154 ~ 2923348 (+) | False | LOC113547478 |
| XM_034309598.1 | mRNA | downstream | 30857 | 2906154 ~ 2922463 (+) | False | LOC113547478 |
| TU224759 | other | upstream | 113145 | 2760693 ~ 2761010 (+) | True | G189864 |
| TU223925 | other | upstream | 1208818 | 1663092 ~ 1665337 (+) | False | LOC117598477 |
| XR_003403557.2 | other | upstream | 2653787 | 137521 ~ 220368 (+) | False | ccser2b |
| TU224820 | other | downstream | 94828 | 2970125 ~ 2989928 (+) | False | LOC113547538 |
| TU224822 | other | downstream | 94828 | 2970125 ~ 3021609 (+) | False | LOC113547538 |
| TU224959 | other | downstream | 363147 | 3238444 ~ 3239216 (+) | True | G190028 |
| TU225191 | other | downstream | 525970 | 3401267 ~ 3405009 (+) | True | G190212 |
| TU225438 | other | downstream | 906834 | 3782131 ~ 3782495 (+) | False | rasd1 |
