Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224846 |
| length | 927 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 3 |
| gene id | G189941 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 2934355 ~ 2935400 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224845 | lncRNA | upstream | 2975 | 2930933 ~ 2931380 (+) | True | G189940 |
| TU224839 | lncRNA | upstream | 6186 | 2927801 ~ 2928169 (+) | True | G189934 |
| TU224838 | lncRNA | upstream | 8784 | 2925214 ~ 2925571 (+) | True | G189933 |
| TU224817 | lncRNA | upstream | 59058 | 2874155 ~ 2875297 (+) | True | G189916 |
| XR_003404829.2 | lncRNA | upstream | 290171 | 2641841 ~ 2644184 (+) | True | LOC113547470 |
| TU224851 | lncRNA | downstream | 5830 | 2941230 ~ 2941830 (+) | True | G189946 |
| TU224857 | lncRNA | downstream | 17190 | 2952590 ~ 2952855 (+) | True | G189952 |
| TU224860 | lncRNA | downstream | 19650 | 2955050 ~ 2959154 (+) | True | G189953 |
| TU224862 | lncRNA | downstream | 24451 | 2959851 ~ 2960052 (+) | True | G189954 |
| TU224867 | lncRNA | downstream | 31563 | 2966963 ~ 2967611 (+) | True | G189959 |
| XM_026947842.2 | mRNA | upstream | 11007 | 2906154 ~ 2923348 (+) | True | LOC113547478 |
| XM_034309597.1 | mRNA | upstream | 11007 | 2906154 ~ 2923348 (+) | False | LOC113547478 |
| XM_034309596.1 | mRNA | upstream | 11007 | 2906154 ~ 2923348 (+) | False | LOC113547478 |
| XM_034309598.1 | mRNA | upstream | 11892 | 2906154 ~ 2922463 (+) | False | LOC113547478 |
| XM_034309599.1 | mRNA | upstream | 11892 | 2906154 ~ 2922463 (+) | False | LOC113547478 |
| XM_026947841.2 | mRNA | downstream | 141693 | 3077093 ~ 3082950 (+) | True | LOC113547477 |
| XM_026947827.2 | mRNA | downstream | 158604 | 3094004 ~ 3099985 (+) | True | LOC113547472 |
| XM_026947828.2 | mRNA | downstream | 158606 | 3094006 ~ 3099985 (+) | False | LOC113547472 |
| XM_026947847.2 | mRNA | downstream | 164804 | 3100204 ~ 3107200 (+) | True | mto1 |
| XM_026947901.2 | mRNA | downstream | 183094 | 3118494 ~ 3126524 (+) | True | LOC113547522 |
| TU224759 | other | upstream | 173345 | 2760693 ~ 2761010 (+) | True | G189864 |
| TU223925 | other | upstream | 1269018 | 1663092 ~ 1665337 (+) | False | LOC117598477 |
| XR_003403557.2 | other | upstream | 2713987 | 137521 ~ 220368 (+) | False | ccser2b |
| TU224820 | other | downstream | 34725 | 2970125 ~ 2989928 (+) | False | LOC113547538 |
| TU224822 | other | downstream | 34725 | 2970125 ~ 3021609 (+) | False | LOC113547538 |
| TU224959 | other | downstream | 303044 | 3238444 ~ 3239216 (+) | True | G190028 |
| TU225191 | other | downstream | 465867 | 3401267 ~ 3405009 (+) | True | G190212 |
| TU225438 | other | downstream | 846731 | 3782131 ~ 3782495 (+) | False | rasd1 |
