Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224959 |
| length | 743 |
| RNA type | TUCP |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G190028 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 3238444 ~ 3239216 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224964 | lncRNA | upstream | 3834 | 3234389 ~ 3234610 (+) | True | G190033 |
| TU224958 | lncRNA | upstream | 16135 | 3221937 ~ 3222309 (+) | True | G190027 |
| TU224908 | lncRNA | upstream | 86963 | 3062072 ~ 3151481 (+) | True | G189987 |
| TU224911 | lncRNA | upstream | 86963 | 3062072 ~ 3151481 (+) | False | G189987 |
| TU224910 | lncRNA | upstream | 86963 | 3127491 ~ 3151481 (+) | False | G189987 |
| TU225095 | lncRNA | downstream | 26285 | 3265501 ~ 3265710 (+) | True | G190122 |
| TU225137 | lncRNA | downstream | 113442 | 3352658 ~ 3352920 (+) | True | G190160 |
| TU225147 | lncRNA | downstream | 127878 | 3367094 ~ 3367293 (+) | True | G190170 |
| TU225208 | lncRNA | downstream | 191097 | 3430313 ~ 3432405 (+) | False | LOC113547484 |
| XR_004579240.1 | lncRNA | downstream | 237854 | 3477070 ~ 3482359 (+) | True | LOC117598604 |
| XM_026947840.2 | mRNA | upstream | 62792 | 3169668 ~ 3175652 (+) | True | pelo |
| XM_026947819.2 | mRNA | upstream | 102278 | 3129716 ~ 3136166 (+) | True | sult1st6 |
| XM_026947820.2 | mRNA | upstream | 102278 | 3129716 ~ 3136166 (+) | False | sult1st6 |
| XM_026947901.2 | mRNA | upstream | 111920 | 3118494 ~ 3126524 (+) | True | LOC113547522 |
| XM_026947847.2 | mRNA | upstream | 131244 | 3100204 ~ 3107200 (+) | True | mto1 |
| XM_026947879.2 | mRNA | downstream | 4906 | 3244122 ~ 3249224 (+) | True | pkmyt1 |
| XM_026947880.2 | mRNA | downstream | 12486 | 3251702 ~ 3253802 (+) | True | LOC113547507 |
| XM_026947915.2 | mRNA | downstream | 22318 | 3261534 ~ 3265222 (+) | True | LOC113547534 |
| XM_026947858.2 | mRNA | downstream | 176988 | 3416204 ~ 3417931 (+) | True | LOC113547491 |
| XM_034309054.1 | mRNA | downstream | 191223 | 3430439 ~ 3453426 (+) | True | LOC113547484 |
| TU224822 | other | upstream | 216835 | 2970125 ~ 3021609 (+) | False | LOC113547538 |
| TU224820 | other | upstream | 248516 | 2970125 ~ 2989928 (+) | False | LOC113547538 |
| TU224759 | other | upstream | 477434 | 2760693 ~ 2761010 (+) | True | G189864 |
| TU223925 | other | upstream | 1573107 | 1663092 ~ 1665337 (+) | False | LOC117598477 |
| XR_003403557.2 | other | upstream | 3018076 | 137521 ~ 220368 (+) | False | ccser2b |
| TU225191 | other | downstream | 162051 | 3401267 ~ 3405009 (+) | True | G190212 |
| TU225438 | other | downstream | 542915 | 3782131 ~ 3782495 (+) | False | rasd1 |
| trnae-cuc_25 | other | downstream | 1194025 | 4433241 ~ 4433312 (+) | True | trnae-cuc_25 |
| TU225847 | other | downstream | 1353891 | 4593107 ~ 4595113 (+) | False | lrrc18b |
| TU225934 | other | downstream | 1515881 | 4755097 ~ 4839369 (+) | False | G190865 |
