Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU225033 |
| length | 240 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G190094 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 3155911 ~ 3156150 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU225014 | lncRNA | downstream | 78621 | 3077031 ~ 3077290 (-) | True | G190076 |
| TU224982 | lncRNA | downstream | 244656 | 2911012 ~ 2911255 (-) | True | G190048 |
| TU224779 | lncRNA | downstream | 328104 | 2796507 ~ 2827807 (-) | True | G189882 |
| TU224786 | lncRNA | downstream | 345992 | 2806601 ~ 2809919 (-) | False | LOC113547504 |
| TU224782 | lncRNA | downstream | 352947 | 2792827 ~ 2802964 (-) | True | G189885 |
| TU225036 | lncRNA | upstream | 14733 | 3170883 ~ 3171571 (-) | True | G190097 |
| TU225038 | lncRNA | upstream | 16910 | 3173060 ~ 3173967 (-) | True | G190099 |
| TU225044 | lncRNA | upstream | 17927 | 3174077 ~ 3175635 (-) | True | G190100 |
| TU225042 | lncRNA | upstream | 18836 | 3174986 ~ 3175635 (-) | False | G190100 |
| TU225039 | lncRNA | upstream | 18924 | 3175074 ~ 3175635 (-) | False | G190100 |
| XM_034309530.1 | mRNA | downstream | 4455 | 3137134 ~ 3151456 (-) | False | atp2a1l |
| XM_026947883.2 | mRNA | downstream | 4456 | 3137134 ~ 3151455 (-) | True | atp2a1l |
| XM_026947881.2 | mRNA | downstream | 37847 | 3107185 ~ 3118064 (-) | True | LOC113547508 |
| XM_026947854.2 | mRNA | downstream | 87770 | 3033048 ~ 3068141 (-) | False | LOC113547488 |
| XM_026947853.2 | mRNA | downstream | 87770 | 3033048 ~ 3068141 (-) | True | LOC113547488 |
| XM_026947876.2 | mRNA | upstream | 3838 | 3159988 ~ 3167791 (-) | True | ppp1cab |
| XM_026947914.2 | mRNA | upstream | 20754 | 3176904 ~ 3180468 (-) | False | LOC113547533 |
| XM_026947913.2 | mRNA | upstream | 20754 | 3176904 ~ 3180468 (-) | False | LOC113547533 |
| XM_026947912.2 | mRNA | upstream | 20754 | 3176904 ~ 3180468 (-) | True | LOC113547533 |
| XM_034309015.1 | mRNA | upstream | 26920 | 3183070 ~ 3205679 (-) | False | cmn |
| TU224811 | other | downstream | 300418 | 2852055 ~ 2855493 (-) | True | ndufa4 |
| TU224780 | other | downstream | 341331 | 2793046 ~ 2814580 (-) | False | LOC117598559 |
| TU224784 | other | downstream | 350005 | 2800076 ~ 2805906 (-) | False | LOC113547504 |
| XR_003404831.2 | other | downstream | 944932 | 2194987 ~ 2210979 (-) | False | LOC113547489 |
| TU223956 | other | downstream | 1584838 | 1568286 ~ 1571073 (-) | True | G189199 |
| trnap-cgg_2 | other | upstream | 1742624 | 4898774 ~ 4898845 (-) | True | trnap-cgg_2 |
| trnap-agg_2 | other | upstream | 1743816 | 4899966 ~ 4900037 (-) | True | trnap-agg_2 |
| trnap-ugg_3 | other | upstream | 1744986 | 4901136 ~ 4901207 (-) | True | trnap-ugg_3 |
| trnap-ugg_4 | other | upstream | 1746178 | 4902328 ~ 4902399 (-) | True | trnap-ugg_4 |
| trnap-ugg_5 | other | upstream | 1747471 | 4903621 ~ 4903691 (-) | True | trnap-ugg_5 |
