Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026934735.2 |
| length | 1382 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 3 |
| gene id | rasd1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 3781161 ~ 3783609 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0006184 | obsolete GTP catabolic process | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07843 | RASD1; RAS, dexamethasone-induced Ras-related protein 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU225348 | lncRNA | upstream | 58116 | 3721942 ~ 3723045 (+) | False | lmf1 |
| TU225343 | lncRNA | upstream | 92829 | 3688098 ~ 3688332 (+) | True | G190352 |
| XR_004579241.1 | lncRNA | upstream | 247918 | 3522966 ~ 3533243 (+) | True | LOC117598605 |
| TU225268 | lncRNA | upstream | 269988 | 3510795 ~ 3511173 (+) | True | G190279 |
| TU225266 | lncRNA | upstream | 272934 | 3508025 ~ 3508227 (+) | True | G190277 |
| TU225435 | lncRNA | downstream | 623 | 3784232 ~ 3785098 (+) | True | G190423 |
| TU225489 | lncRNA | downstream | 120471 | 3904080 ~ 3905283 (+) | False | p4ha1a |
| TU225488 | lncRNA | downstream | 187451 | 3971060 ~ 3971933 (+) | True | G190462 |
| XR_004579139.1 | lncRNA | downstream | 197071 | 3980680 ~ 3988391 (+) | True | LOC117598473 |
| TU225574 | lncRNA | downstream | 202760 | 3986369 ~ 3994201 (+) | False | LOC117598473 |
| XM_026934583.2 | mRNA | upstream | 8532 | 3731785 ~ 3772629 (+) | False | pemt |
| XM_026934582.2 | mRNA | upstream | 8532 | 3731790 ~ 3772629 (+) | True | pemt |
| XM_026934779.2 | mRNA | upstream | 57918 | 3697794 ~ 3723243 (+) | True | lmf1 |
| XM_034309408.1 | mRNA | upstream | 100562 | 3667153 ~ 3680599 (+) | False | prdm9 |
| XM_026934864.2 | mRNA | upstream | 100562 | 3668308 ~ 3680599 (+) | True | prdm9 |
| XM_026934619.2 | mRNA | downstream | 50497 | 3834106 ~ 3849629 (+) | True | cops3 |
| XM_034309195.1 | mRNA | downstream | 67069 | 3850678 ~ 3885740 (+) | True | usp22 |
| XM_026934608.2 | mRNA | downstream | 110674 | 3894283 ~ 3899869 (+) | True | dnajc9 |
| XM_034309038.1 | mRNA | downstream | 119738 | 3903347 ~ 3930443 (+) | False | p4ha1a |
| XM_034309039.1 | mRNA | downstream | 120669 | 3904278 ~ 3930443 (+) | True | p4ha1a |
| TU225191 | other | upstream | 376152 | 3401267 ~ 3405009 (+) | True | G190212 |
| TU224959 | other | upstream | 541945 | 3238444 ~ 3239216 (+) | True | G190028 |
| TU224822 | other | upstream | 759552 | 2970125 ~ 3021609 (+) | False | LOC113547538 |
| TU224820 | other | upstream | 791233 | 2970125 ~ 2989928 (+) | False | LOC113547538 |
| TU224759 | other | upstream | 1020151 | 2760693 ~ 2761010 (+) | True | G189864 |
| trnae-cuc_25 | other | downstream | 649632 | 4433241 ~ 4433312 (+) | True | trnae-cuc_25 |
| TU225847 | other | downstream | 809498 | 4593107 ~ 4595113 (+) | False | lrrc18b |
| TU225934 | other | downstream | 971488 | 4755097 ~ 4839369 (+) | False | G190865 |
| TU226411 | other | downstream | 1553644 | 5337253 ~ 5340563 (+) | False | LOC113527051 |
| TU226808 | other | downstream | 2186134 | 5969743 ~ 5983237 (+) | True | G191581 |
