Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU225794 |
| length | 387 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G190742 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 4288417 ~ 4288803 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU225783 | lncRNA | downstream | 29663 | 4254493 ~ 4258754 (-) | True | G190731 |
| TU225706 | lncRNA | downstream | 127410 | 4159776 ~ 4161007 (-) | True | G190656 |
| TU225612 | lncRNA | downstream | 251077 | 4036651 ~ 4037340 (-) | True | G190563 |
| TU225525 | lncRNA | downstream | 363187 | 3920191 ~ 3925230 (-) | True | G190490 |
| XR_004579147.1 | lncRNA | downstream | 438497 | 3845785 ~ 3849920 (-) | True | LOC117598488 |
| TU225878 | lncRNA | upstream | 284879 | 4573682 ~ 4575530 (-) | True | G190821 |
| TU225890 | lncRNA | upstream | 307736 | 4596539 ~ 4596823 (-) | True | G190829 |
| TU225914 | lncRNA | upstream | 377509 | 4666312 ~ 4666571 (-) | True | G190849 |
| TU225963 | lncRNA | upstream | 412301 | 4701104 ~ 4750877 (-) | True | G190885 |
| TU226166 | lncRNA | upstream | 622931 | 4911734 ~ 4918977 (-) | True | trnap-cgg_3 |
| XM_026915506.2 | mRNA | downstream | 272104 | 4013847 ~ 4016313 (-) | True | LOC113527563 |
| XM_026914513.2 | mRNA | downstream | 283540 | 4000449 ~ 4004877 (-) | True | sstr2a |
| XM_034309403.1 | mRNA | downstream | 316532 | 3938282 ~ 3971885 (-) | True | heatr1 |
| XM_026935101.2 | mRNA | downstream | 353279 | 3930440 ~ 3935138 (-) | True | arg1 |
| XM_026934960.2 | mRNA | downstream | 457608 | 3815947 ~ 3830809 (-) | True | LOC113539277 |
| XM_026915800.2 | mRNA | upstream | 3148 | 4291951 ~ 4295240 (-) | True | sox9a |
| XM_026915799.2 | mRNA | upstream | 261305 | 4550108 ~ 4558134 (-) | True | LOC113527719 |
| XM_034309645.1 | mRNA | upstream | 261305 | 4550108 ~ 4557928 (-) | False | LOC113527719 |
| XM_026915146.2 | mRNA | upstream | 336795 | 4625598 ~ 4648676 (-) | True | mapk8b |
| XM_026915203.2 | mRNA | upstream | 481741 | 4770544 ~ 4787576 (-) | False | ubtd1b |
| TU224811 | other | downstream | 1432924 | 2852055 ~ 2855493 (-) | True | ndufa4 |
| TU224780 | other | downstream | 1473837 | 2793046 ~ 2814580 (-) | False | LOC117598559 |
| TU224784 | other | downstream | 1482511 | 2800076 ~ 2805906 (-) | False | LOC113547504 |
| XR_003404831.2 | other | downstream | 2077438 | 2194987 ~ 2210979 (-) | False | LOC113547489 |
| TU223956 | other | downstream | 2717344 | 1568286 ~ 1571073 (-) | True | G189199 |
| trnap-cgg_2 | other | upstream | 609971 | 4898774 ~ 4898845 (-) | True | trnap-cgg_2 |
| trnap-agg_2 | other | upstream | 611163 | 4899966 ~ 4900037 (-) | True | trnap-agg_2 |
| trnap-ugg_3 | other | upstream | 612333 | 4901136 ~ 4901207 (-) | True | trnap-ugg_3 |
| trnap-ugg_4 | other | upstream | 613525 | 4902328 ~ 4902399 (-) | True | trnap-ugg_4 |
| trnap-ugg_5 | other | upstream | 614818 | 4903621 ~ 4903691 (-) | True | trnap-ugg_5 |
