Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU225847 |
| length | 1120 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 2 |
| gene id | lrrc18b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 4593107 ~ 4596029 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU225827 | lncRNA | upstream | 106351 | 4486523 ~ 4486756 (+) | True | G190775 |
| TU225800 | lncRNA | upstream | 295868 | 4296393 ~ 4297239 (+) | True | G190748 |
| TU225719 | lncRNA | upstream | 306456 | 4232895 ~ 4286651 (+) | True | G190668 |
| XR_004579130.1 | lncRNA | upstream | 336059 | 4248183 ~ 4257048 (+) | True | LOC113527449 |
| TU225713 | lncRNA | upstream | 354729 | 4178019 ~ 4238378 (+) | False | LOC113527450 |
| TU225848 | lncRNA | downstream | 1577 | 4596690 ~ 4596929 (+) | True | G190795 |
| TU225852 | lncRNA | downstream | 30506 | 4625619 ~ 4628876 (+) | True | G190797 |
| TU225933 | lncRNA | downstream | 159984 | 4755097 ~ 4839369 (+) | False | G190865 |
| TU225936 | lncRNA | downstream | 159984 | 4755097 ~ 4839369 (+) | True | G190865 |
| TU226075 | lncRNA | downstream | 464404 | 5059517 ~ 5063419 (+) | True | G190964 |
| XM_026915384.2 | mRNA | upstream | 6607 | 4570058 ~ 4586500 (+) | True | vstm4b |
| XM_034309491.1 | mRNA | upstream | 25585 | 4563813 ~ 4567522 (+) | True | LOC113527299 |
| XM_034309492.1 | mRNA | upstream | 25585 | 4563813 ~ 4567522 (+) | False | LOC113527299 |
| XM_034309352.1 | mRNA | upstream | 45377 | 4543977 ~ 4547730 (+) | True | LOC113527300 |
| XM_026915663.2 | mRNA | upstream | 433906 | 4030900 ~ 4159201 (+) | False | LOC113527654 |
| XM_026915685.2 | mRNA | downstream | 5187 | 4600300 ~ 4625347 (+) | True | si:dkey-191m6.4 |
| XM_026915686.2 | mRNA | downstream | 5188 | 4600301 ~ 4625347 (+) | False | si:dkey-191m6.4 |
| XM_026915688.2 | mRNA | downstream | 25483 | 4620596 ~ 4625347 (+) | False | si:dkey-191m6.4 |
| XM_026914937.2 | mRNA | downstream | 56607 | 4651720 ~ 4669858 (+) | True | frmpd2 |
| XM_026915450.2 | mRNA | downstream | 116382 | 4711495 ~ 4714663 (+) | True | gdf10b |
| trnae-cuc_25 | other | upstream | 159795 | 4433241 ~ 4433312 (+) | True | trnae-cuc_25 |
| TU225438 | other | upstream | 810612 | 3782131 ~ 3782495 (+) | False | rasd1 |
| TU225191 | other | upstream | 1188098 | 3401267 ~ 3405009 (+) | True | G190212 |
| TU224959 | other | upstream | 1353891 | 3238444 ~ 3239216 (+) | True | G190028 |
| TU224822 | other | upstream | 1571498 | 2970125 ~ 3021609 (+) | False | LOC113547538 |
| TU225934 | other | downstream | 159984 | 4755097 ~ 4839369 (+) | False | G190865 |
| TU226411 | other | downstream | 742140 | 5337253 ~ 5340563 (+) | False | LOC113527051 |
| TU226808 | other | downstream | 1374630 | 5969743 ~ 5983237 (+) | True | G191581 |
| trnas-gcu_1 | other | downstream | 1620732 | 6215845 ~ 6215926 (+) | True | trnas-gcu_1 |
| trnal-aag_2 | other | downstream | 1621254 | 6216367 ~ 6216448 (+) | True | trnal-aag_2 |
