Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU226226 |
| length | 777 |
| RNA type | TUCP |
| GC content | 0.42 |
| exon number | 3 |
| gene id | LOC113527048 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 5059498 ~ 5063418 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU226166 | lncRNA | downstream | 140550 | 4911734 ~ 4918977 (-) | True | trnap-cgg_3 |
| TU225963 | lncRNA | downstream | 308650 | 4701104 ~ 4750877 (-) | True | G190885 |
| TU225914 | lncRNA | downstream | 392956 | 4666312 ~ 4666571 (-) | True | G190849 |
| TU225890 | lncRNA | downstream | 462704 | 4596539 ~ 4596823 (-) | True | G190829 |
| TU225878 | lncRNA | downstream | 483997 | 4573682 ~ 4575530 (-) | True | G190821 |
| TU226433 | lncRNA | upstream | 319600 | 5382995 ~ 5387137 (-) | True | G191279 |
| TU226592 | lncRNA | upstream | 379567 | 5442962 ~ 5445167 (-) | True | G191413 |
| TU226604 | lncRNA | upstream | 419225 | 5482620 ~ 5484667 (-) | True | G191424 |
| TU226605 | lncRNA | upstream | 425422 | 5488817 ~ 5489111 (-) | False | gdpd3b |
| TU226650 | lncRNA | upstream | 602778 | 5666173 ~ 5667846 (-) | True | G191463 |
| XM_034309046.1 | mRNA | downstream | 61195 | 4991942 ~ 4998332 (-) | True | pagr1 |
| XM_026915586.2 | mRNA | downstream | 209849 | 4837911 ~ 4849678 (-) | True | fam20a |
| XM_034309628.1 | mRNA | downstream | 232175 | 4810652 ~ 4827352 (-) | False | zdhhc16b |
| XM_026915838.2 | mRNA | downstream | 238942 | 4810652 ~ 4820585 (-) | False | zdhhc16b |
| XM_026915839.2 | mRNA | downstream | 241836 | 4810652 ~ 4817691 (-) | True | zdhhc16b |
| XM_026914728.2 | mRNA | upstream | 192869 | 5256264 ~ 5265357 (-) | True | g6pc3 |
| XM_026914669.2 | mRNA | upstream | 226317 | 5289712 ~ 5294398 (-) | True | tmem101 |
| XM_034309110.1 | mRNA | upstream | 248849 | 5312244 ~ 5322475 (-) | True | LOC113527073 |
| XM_026915784.2 | mRNA | upstream | 341787 | 5405182 ~ 5416607 (-) | True | sgca |
| XM_034309354.1 | mRNA | upstream | 383077 | 5446472 ~ 5456359 (-) | True | lrrc45 |
| TU226185 | other | downstream | 106668 | 4949163 ~ 4952859 (-) | True | G191056 |
| trnap-cgg_3 | other | downstream | 140555 | 4918901 ~ 4918972 (-) | False | trnap-cgg_3 |
| trnap-agg_4 | other | downstream | 141640 | 4917816 ~ 4917887 (-) | True | trnap-agg_4 |
| trnap-ugg_13 | other | downstream | 143951 | 4915505 ~ 4915576 (-) | True | trnap-ugg_13 |
| trnap-ugg_12 | other | downstream | 145141 | 4914316 ~ 4914386 (-) | True | trnap-ugg_12 |
| trnai-uau_5 | other | upstream | 238718 | 5302113 ~ 5302205 (-) | True | trnai-uau_5 |
| trnav-uac_7 | other | upstream | 410003 | 5473398 ~ 5473470 (-) | True | trnav-uac_7 |
| TU226617 | other | upstream | 547725 | 5611120 ~ 5613954 (-) | True | G191430 |
| TU226699 | other | upstream | 705133 | 5768528 ~ 5776020 (-) | False | LOC113527291 |
| XR_004579320.1 | other | upstream | 1484676 | 6548071 ~ 6594390 (-) | False | itga3b |
