Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU226403 |
| length | 725 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 3 |
| gene id | gngt2b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 5303077 ~ 5304909 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU226154 | lncRNA | upstream | 20498 | 5269247 ~ 5282643 (+) | True | G191032 |
| TU226144 | lncRNA | upstream | 41056 | 5256441 ~ 5262085 (+) | True | G191026 |
| TU226075 | lncRNA | upstream | 239722 | 5059517 ~ 5063419 (+) | True | G190964 |
| TU225933 | lncRNA | upstream | 463772 | 4755097 ~ 4839369 (+) | False | G190865 |
| TU225936 | lncRNA | upstream | 463772 | 4755097 ~ 4839369 (+) | True | G190865 |
| TU226407 | lncRNA | downstream | 3310 | 5308219 ~ 5309374 (+) | True | G191258 |
| TU226420 | lncRNA | downstream | 58379 | 5363288 ~ 5363503 (+) | True | G191266 |
| TU226421 | lncRNA | downstream | 61227 | 5366136 ~ 5366358 (+) | True | G191267 |
| TU226427 | lncRNA | downstream | 77688 | 5382597 ~ 5382809 (+) | True | G191273 |
| TU226475 | lncRNA | downstream | 207782 | 5512691 ~ 5513155 (+) | True | G191310 |
| XM_026915637.2 | mRNA | upstream | 18991 | 5267793 ~ 5284150 (+) | True | lsm12b |
| XM_026915012.2 | mRNA | upstream | 52629 | 5077518 ~ 5250512 (+) | False | tanc2b |
| XM_026914520.2 | mRNA | downstream | 25133 | 5330042 ~ 5340521 (+) | True | LOC113527051 |
| XM_026915780.2 | mRNA | downstream | 78102 | 5383011 ~ 5404806 (+) | True | col1a1b |
| XM_026915781.2 | mRNA | downstream | 78102 | 5383011 ~ 5404806 (+) | False | col1a1b |
| XM_026915782.2 | mRNA | downstream | 78102 | 5383011 ~ 5404806 (+) | False | col1a1b |
| XM_026914576.2 | mRNA | downstream | 117890 | 5422799 ~ 5434479 (+) | True | rfng |
| TU225934 | other | upstream | 463772 | 4755097 ~ 4839369 (+) | False | G190865 |
| TU225847 | other | upstream | 708028 | 4593107 ~ 4595113 (+) | False | lrrc18b |
| trnae-cuc_25 | other | upstream | 869829 | 4433241 ~ 4433312 (+) | True | trnae-cuc_25 |
| TU225438 | other | upstream | 1520646 | 3782131 ~ 3782495 (+) | False | rasd1 |
| TU225191 | other | upstream | 1898132 | 3401267 ~ 3405009 (+) | True | G190212 |
| TU226411 | other | downstream | 32344 | 5337253 ~ 5340563 (+) | False | LOC113527051 |
| TU226808 | other | downstream | 664834 | 5969743 ~ 5983237 (+) | True | G191581 |
| trnas-gcu_1 | other | downstream | 910936 | 6215845 ~ 6215926 (+) | True | trnas-gcu_1 |
| trnal-aag_2 | other | downstream | 911458 | 6216367 ~ 6216448 (+) | True | trnal-aag_2 |
| trnal-uag | other | downstream | 917808 | 6222717 ~ 6222798 (+) | True | trnal-uag |
