Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU226700 |
| length | 604 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC113527291 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 5768528 ~ 5791270 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU226688 | lncRNA | downstream | 28329 | 5739978 ~ 5740199 (-) | True | G191490 |
| TU226656 | lncRNA | downstream | 78960 | 5688594 ~ 5689568 (-) | True | G191468 |
| TU226652 | lncRNA | downstream | 98775 | 5667884 ~ 5669753 (-) | True | G191464 |
| TU226650 | lncRNA | downstream | 100682 | 5666173 ~ 5667846 (-) | True | G191463 |
| TU226605 | lncRNA | downstream | 279417 | 5488817 ~ 5489111 (-) | False | gdpd3b |
| TU226871 | lncRNA | upstream | 159519 | 5935539 ~ 5938163 (-) | True | LOC113527731 |
| TU226870 | lncRNA | upstream | 159633 | 5935653 ~ 5938163 (-) | False | LOC113527731 |
| TU226872 | lncRNA | upstream | 159633 | 5935653 ~ 5938213 (-) | False | LOC113527731 |
| TU226873 | lncRNA | upstream | 159633 | 5935653 ~ 5938163 (-) | False | LOC113527731 |
| XR_003402884.2 | lncRNA | upstream | 159836 | 5935856 ~ 5938179 (-) | False | LOC113527731 |
| XM_034309612.1 | mRNA | downstream | 59239 | 5692120 ~ 5709289 (-) | False | zgc:92313 |
| XM_034309610.1 | mRNA | downstream | 59261 | 5692120 ~ 5709267 (-) | False | zgc:92313 |
| XM_034309609.1 | mRNA | downstream | 59640 | 5692120 ~ 5708888 (-) | False | zgc:92313 |
| XM_034309608.1 | mRNA | downstream | 59640 | 5692120 ~ 5708888 (-) | False | zgc:92313 |
| XM_034309613.1 | mRNA | downstream | 60643 | 5692120 ~ 5707885 (-) | False | zgc:92313 |
| XM_026914891.2 | mRNA | upstream | 31800 | 5807820 ~ 5814472 (-) | True | LOC113527266 |
| XM_026914889.2 | mRNA | upstream | 41672 | 5817692 ~ 5849431 (-) | True | LOC113527265 |
| XM_034309034.1 | mRNA | upstream | 90921 | 5866941 ~ 5882707 (-) | True | irf3 |
| XM_026914580.2 | mRNA | upstream | 109485 | 5885505 ~ 5903485 (-) | True | prr12a |
| XM_034309639.1 | mRNA | upstream | 134414 | 5910434 ~ 5932525 (-) | False | si:ch211-255p10.4 |
| TU226617 | other | downstream | 154574 | 5611120 ~ 5613954 (-) | True | G191430 |
| trnav-uac_7 | other | downstream | 295058 | 5473398 ~ 5473470 (-) | True | trnav-uac_7 |
| trnai-uau_5 | other | downstream | 466323 | 5302113 ~ 5302205 (-) | True | trnai-uau_5 |
| TU226226 | other | downstream | 705133 | 5059527 ~ 5063395 (-) | False | LOC113527048 |
| TU226185 | other | downstream | 815669 | 4949163 ~ 4952859 (-) | True | G191056 |
| XR_004579320.1 | other | upstream | 772051 | 6548071 ~ 6594390 (-) | False | itga3b |
| trnap-agg_9 | other | upstream | 2682307 | 8458327 ~ 8458396 (-) | True | trnap-agg_9 |
| trnal-uag_3 | other | upstream | 2699239 | 8475259 ~ 8475340 (-) | True | trnal-uag_3 |
| XR_004579166.1 | other | upstream | 3071642 | 8847662 ~ 8857748 (-) | False | si:dkey-94l16.4 |
| trnaa-ugc_6 | other | upstream | 3300769 | 9076789 ~ 9076860 (-) | True | trnaa-ugc_6 |
