Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU227164 |
| length | 204 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G191866 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 6460811 ~ 6461014 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU226989 | lncRNA | upstream | 189926 | 6268524 ~ 6270885 (+) | True | G191719 |
| TU226978 | lncRNA | upstream | 243717 | 6215273 ~ 6217094 (+) | True | G191711 |
| TU226826 | lncRNA | upstream | 405606 | 6001068 ~ 6055205 (+) | True | G191595 |
| TU226822 | lncRNA | upstream | 512225 | 5946225 ~ 5948586 (+) | True | G191591 |
| TU226819 | lncRNA | upstream | 519964 | 5940621 ~ 5940847 (+) | True | G191588 |
| TU227167 | lncRNA | downstream | 2375 | 6463389 ~ 6473466 (+) | True | G191868 |
| TU227354 | lncRNA | downstream | 235718 | 6696732 ~ 6696970 (+) | True | G192029 |
| TU227359 | lncRNA | downstream | 264971 | 6725985 ~ 6728391 (+) | True | LOC113527389 |
| TU227373 | lncRNA | downstream | 317150 | 6778164 ~ 6785596 (+) | True | G192043 |
| TU227745 | lncRNA | downstream | 938329 | 7399343 ~ 7399628 (+) | True | G192394 |
| XM_034309170.1 | mRNA | upstream | 44002 | 6330477 ~ 6416809 (+) | True | plce1 |
| XM_034309175.1 | mRNA | upstream | 44002 | 6330477 ~ 6416809 (+) | False | plce1 |
| XM_034309173.1 | mRNA | upstream | 44002 | 6330477 ~ 6416809 (+) | False | plce1 |
| XM_034309176.1 | mRNA | upstream | 44002 | 6330477 ~ 6416809 (+) | False | plce1 |
| XM_034309174.1 | mRNA | upstream | 44002 | 6330477 ~ 6416809 (+) | False | plce1 |
| XM_026915208.2 | mRNA | downstream | 65219 | 6526233 ~ 6546253 (+) | True | ace |
| XM_026914756.2 | mRNA | downstream | 157637 | 6618651 ~ 6622647 (+) | True | dlx3b |
| XM_026915161.2 | mRNA | downstream | 264313 | 6725327 ~ 6728144 (+) | False | LOC113527389 |
| XM_026915160.2 | mRNA | downstream | 264313 | 6725327 ~ 6726818 (+) | False | LOC113527389 |
| XM_026915158.2 | mRNA | downstream | 278739 | 6739753 ~ 6745801 (+) | True | ptges3l |
| trnas-gcu_4 | other | upstream | 230508 | 6230222 ~ 6230303 (+) | True | trnas-gcu_4 |
| trnas-gcu_3 | other | upstream | 235626 | 6225104 ~ 6225185 (+) | True | trnas-gcu_3 |
| trnal-aag_3 | other | upstream | 236705 | 6224025 ~ 6224106 (+) | True | trnal-aag_3 |
| trnas-gcu_2 | other | upstream | 237194 | 6223536 ~ 6223617 (+) | True | trnas-gcu_2 |
| trnal-uag | other | upstream | 238013 | 6222717 ~ 6222798 (+) | True | trnal-uag |
| TU227356 | other | downstream | 264307 | 6725321 ~ 6728391 (+) | False | LOC113527389 |
| trnap-cgg_4 | other | downstream | 310293 | 6771307 ~ 6771378 (+) | True | trnap-cgg_4 |
| trnap-ugg_14 | other | downstream | 311427 | 6772441 ~ 6772512 (+) | True | trnap-ugg_14 |
| trnal-uag_1 | other | downstream | 312589 | 6773603 ~ 6773674 (+) | True | trnal-uag_1 |
| trnap-ugg_15 | other | downstream | 313742 | 6774756 ~ 6774827 (+) | True | trnap-ugg_15 |
