Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU227332 |
| length | 730 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G192012 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 6545032 ~ 6546253 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU227251 | lncRNA | downstream | 56293 | 6463488 ~ 6488739 (-) | True | G191947 |
| TU227257 | lncRNA | downstream | 63863 | 6479767 ~ 6481169 (-) | True | G191950 |
| TU227256 | lncRNA | downstream | 66215 | 6478189 ~ 6478817 (-) | True | G191949 |
| TU227253 | lncRNA | downstream | 71449 | 6463488 ~ 6473583 (-) | False | G191947 |
| TU227076 | lncRNA | downstream | 249239 | 6293530 ~ 6295793 (-) | True | G191788 |
| TU227335 | lncRNA | upstream | 75217 | 6621470 ~ 6622643 (-) | True | G192014 |
| TU227400 | lncRNA | upstream | 243613 | 6789866 ~ 6790153 (-) | True | G192070 |
| TU227391 | lncRNA | upstream | 249858 | 6796111 ~ 6796506 (-) | True | G192061 |
| TU227392 | lncRNA | upstream | 253389 | 6799642 ~ 6800076 (-) | True | G192062 |
| TU227407 | lncRNA | upstream | 261952 | 6808205 ~ 6809758 (-) | True | G192075 |
| XM_026915558.2 | mRNA | downstream | 31947 | 6507850 ~ 6513085 (-) | True | abi3b |
| XM_026915245.2 | mRNA | downstream | 40303 | 6465015 ~ 6504729 (-) | True | LOC113527434 |
| XM_026914996.2 | mRNA | downstream | 84673 | 6437679 ~ 6460359 (-) | False | tbc1d12b |
| XM_026914995.2 | mRNA | downstream | 84673 | 6437679 ~ 6460359 (-) | True | tbc1d12b |
| XM_026914548.2 | mRNA | downstream | 109026 | 6417476 ~ 6436006 (-) | True | noc3l |
| XM_034309642.1 | mRNA | upstream | 688 | 6546941 ~ 6594390 (-) | True | itga3b |
| XM_026914793.2 | mRNA | upstream | 91102 | 6637355 ~ 6646574 (-) | True | dlx4b |
| XM_026915153.2 | mRNA | upstream | 181328 | 6727581 ~ 6740582 (-) | True | kat7b |
| XM_026915156.2 | mRNA | upstream | 200799 | 6747052 ~ 6752732 (-) | True | g6pca.1 |
| XM_026915154.2 | mRNA | upstream | 210532 | 6756785 ~ 6766100 (-) | True | aarsd1 |
| TU226699 | other | downstream | 769012 | 5768528 ~ 5776020 (-) | False | LOC113527291 |
| TU226617 | other | downstream | 931078 | 5611120 ~ 5613954 (-) | True | G191430 |
| trnav-uac_7 | other | downstream | 1071562 | 5473398 ~ 5473470 (-) | True | trnav-uac_7 |
| trnai-uau_5 | other | downstream | 1242827 | 5302113 ~ 5302205 (-) | True | trnai-uau_5 |
| TU226226 | other | downstream | 1481637 | 5059527 ~ 5063395 (-) | False | LOC113527048 |
| XR_004579320.1 | other | upstream | 1818 | 6548071 ~ 6594390 (-) | False | itga3b |
| trnap-agg_9 | other | upstream | 1912074 | 8458327 ~ 8458396 (-) | True | trnap-agg_9 |
| trnal-uag_3 | other | upstream | 1929006 | 8475259 ~ 8475340 (-) | True | trnal-uag_3 |
| XR_004579166.1 | other | upstream | 2301409 | 8847662 ~ 8857748 (-) | False | si:dkey-94l16.4 |
| trnaa-ugc_6 | other | upstream | 2530536 | 9076789 ~ 9076860 (-) | True | trnaa-ugc_6 |
