Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU227391 |
| length | 396 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G192061 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 6796111 ~ 6796506 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU227400 | lncRNA | downstream | 5958 | 6789866 ~ 6790153 (-) | True | G192070 |
| TU227335 | lncRNA | downstream | 173468 | 6621470 ~ 6622643 (-) | True | G192014 |
| TU227332 | lncRNA | downstream | 249858 | 6545032 ~ 6546253 (-) | True | G192012 |
| TU227257 | lncRNA | downstream | 314942 | 6479767 ~ 6481169 (-) | True | G191950 |
| TU227256 | lncRNA | downstream | 317294 | 6478189 ~ 6478817 (-) | True | G191949 |
| TU227392 | lncRNA | upstream | 3136 | 6799642 ~ 6800076 (-) | True | G192062 |
| TU227407 | lncRNA | upstream | 11699 | 6808205 ~ 6809758 (-) | True | G192075 |
| TU227408 | lncRNA | upstream | 11699 | 6808205 ~ 6808795 (-) | False | G192075 |
| TU227404 | lncRNA | upstream | 16659 | 6813165 ~ 6815435 (-) | True | G192074 |
| TU227405 | lncRNA | upstream | 17042 | 6813548 ~ 6815435 (-) | False | G192074 |
| XM_026915154.2 | mRNA | downstream | 30011 | 6756785 ~ 6766100 (-) | True | aarsd1 |
| XM_026915156.2 | mRNA | downstream | 43379 | 6747052 ~ 6752732 (-) | True | g6pca.1 |
| XM_026915153.2 | mRNA | downstream | 55529 | 6727581 ~ 6740582 (-) | True | kat7b |
| XM_026914793.2 | mRNA | downstream | 149537 | 6637355 ~ 6646574 (-) | True | dlx4b |
| XM_034309642.1 | mRNA | downstream | 201721 | 6546941 ~ 6594390 (-) | True | itga3b |
| XM_034309520.1 | mRNA | upstream | 39931 | 6836437 ~ 6847966 (-) | False | a1cf |
| XM_026915451.2 | mRNA | upstream | 39931 | 6836437 ~ 6847960 (-) | True | a1cf |
| XM_026915452.2 | mRNA | upstream | 39931 | 6836437 ~ 6847957 (-) | False | a1cf |
| XM_026915453.2 | mRNA | upstream | 40918 | 6837424 ~ 6847955 (-) | False | a1cf |
| XM_026915361.2 | mRNA | upstream | 251065 | 7047571 ~ 7232075 (-) | True | pcdh15b |
| XR_004579320.1 | other | downstream | 201721 | 6548071 ~ 6594390 (-) | False | itga3b |
| TU226699 | other | downstream | 1020091 | 5768528 ~ 5776020 (-) | False | LOC113527291 |
| TU226617 | other | downstream | 1182157 | 5611120 ~ 5613954 (-) | True | G191430 |
| trnav-uac_7 | other | downstream | 1322641 | 5473398 ~ 5473470 (-) | True | trnav-uac_7 |
| trnai-uau_5 | other | downstream | 1493906 | 5302113 ~ 5302205 (-) | True | trnai-uau_5 |
| trnap-agg_9 | other | upstream | 1661821 | 8458327 ~ 8458396 (-) | True | trnap-agg_9 |
| trnal-uag_3 | other | upstream | 1678753 | 8475259 ~ 8475340 (-) | True | trnal-uag_3 |
| XR_004579166.1 | other | upstream | 2051156 | 8847662 ~ 8857748 (-) | False | si:dkey-94l16.4 |
| trnaa-ugc_6 | other | upstream | 2280283 | 9076789 ~ 9076860 (-) | True | trnaa-ugc_6 |
| trnal-uag_4 | other | upstream | 2280612 | 9077118 ~ 9077199 (-) | True | trnal-uag_4 |
