Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU227775 |
| length | 498 |
| lncRNA type | intronic |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G192422 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 7474437 ~ 7475004 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU227745 | lncRNA | upstream | 74809 | 7399343 ~ 7399628 (+) | True | G192394 |
| TU227373 | lncRNA | upstream | 688841 | 6778164 ~ 6785596 (+) | True | G192043 |
| TU227359 | lncRNA | upstream | 746046 | 6725985 ~ 6728391 (+) | True | LOC113527389 |
| TU227354 | lncRNA | upstream | 777467 | 6696732 ~ 6696970 (+) | True | G192029 |
| TU227167 | lncRNA | upstream | 1000971 | 6463389 ~ 6473466 (+) | True | G191868 |
| TU228011 | lncRNA | downstream | 464037 | 7939041 ~ 7939584 (+) | True | G192591 |
| TU228075 | lncRNA | downstream | 594139 | 8069143 ~ 8071592 (+) | True | G192650 |
| TU228069 | lncRNA | downstream | 651769 | 8126773 ~ 8141060 (+) | True | G192644 |
| XR_004579326.1 | lncRNA | downstream | 784210 | 8259214 ~ 8261423 (+) | True | LOC117598703 |
| TU228175 | lncRNA | downstream | 794144 | 8269148 ~ 8270226 (+) | True | G192716 |
| XM_034309438.1 | mRNA | upstream | 38701 | 7428545 ~ 7435736 (+) | False | tfam |
| XM_026915648.2 | mRNA | upstream | 450799 | 7021923 ~ 7023638 (+) | True | dkk1b |
| XM_026915240.2 | mRNA | upstream | 458700 | 6862071 ~ 7015737 (+) | False | prkg1b |
| XM_026915239.2 | mRNA | upstream | 458700 | 6869665 ~ 7015737 (+) | True | prkg1b |
| XM_026914654.2 | mRNA | upstream | 638054 | 6822740 ~ 6836383 (+) | True | asah2 |
| XM_026914934.2 | mRNA | downstream | 51584 | 7526588 ~ 7547407 (+) | False | phyhiplb |
| XM_026914935.2 | mRNA | downstream | 54607 | 7529611 ~ 7547407 (+) | True | phyhiplb |
| XM_034309630.1 | mRNA | downstream | 297340 | 7772344 ~ 7795900 (+) | False | rhobtb1 |
| XM_026915840.2 | mRNA | downstream | 304326 | 7779330 ~ 7795900 (+) | True | rhobtb1 |
| XM_034309631.1 | mRNA | downstream | 307161 | 7782165 ~ 7795900 (+) | False | rhobtb1 |
| TU227741 | other | upstream | 38065 | 7428579 ~ 7436372 (+) | True | tfam |
| XR_003402840.2 | other | upstream | 640180 | 6822740 ~ 6834257 (+) | False | asah2 |
| trnap-cgg_7 | other | upstream | 684492 | 6789874 ~ 6789945 (+) | True | trnap-cgg_7 |
| trnap-ugg_20 | other | upstream | 685671 | 6788695 ~ 6788766 (+) | True | trnap-ugg_20 |
| trnap-agg_8 | other | upstream | 686835 | 6787531 ~ 6787602 (+) | True | trnap-agg_8 |
| TU227843 | other | downstream | 130977 | 7605981 ~ 7628111 (+) | True | G192484 |
| trnaa-ugc_7 | other | downstream | 1632682 | 9107686 ~ 9107757 (+) | True | trnaa-ugc_7 |
| trnal-aag_6 | other | downstream | 1632848 | 9107852 ~ 9107933 (+) | True | trnal-aag_6 |
| trnad-guc_4 | other | downstream | 1789770 | 9264774 ~ 9264845 (+) | True | trnad-guc_4 |
| trnad-guc_5 | other | downstream | 1791259 | 9266263 ~ 9266334 (+) | True | trnad-guc_5 |
