Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU228003 |
| length | 1098 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G192583 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 7840363 ~ 7841460 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU227921 | lncRNA | downstream | 72861 | 7722005 ~ 7767502 (-) | False | ank3b |
| TU227929 | lncRNA | downstream | 100355 | 7722005 ~ 7740008 (-) | False | ank3b |
| TU227946 | lncRNA | downstream | 209990 | 7629311 ~ 7630373 (-) | True | G192545 |
| TU227943 | lncRNA | downstream | 257198 | 7581358 ~ 7583165 (-) | False | ccdc6b |
| TU227790 | lncRNA | downstream | 411480 | 7428587 ~ 7428883 (-) | True | G192437 |
| TU228004 | lncRNA | upstream | 169 | 7841629 ~ 7841947 (-) | True | G192584 |
| TU228005 | lncRNA | upstream | 600 | 7842060 ~ 7842634 (-) | True | G192585 |
| TU228034 | lncRNA | upstream | 33306 | 7874766 ~ 7877699 (-) | True | G192611 |
| TU228096 | lncRNA | upstream | 132754 | 7974214 ~ 7977154 (-) | True | G192665 |
| TU228097 | lncRNA | upstream | 132754 | 7974214 ~ 7977065 (-) | False | G192665 |
| XM_026914587.2 | mRNA | downstream | 30597 | 7804520 ~ 7809766 (-) | True | tmem26b |
| XM_034309148.1 | mRNA | downstream | 72851 | 7601218 ~ 7767512 (-) | False | ank3b |
| XM_034309143.1 | mRNA | downstream | 100368 | 7601218 ~ 7739995 (-) | False | ank3b |
| XM_034309155.1 | mRNA | downstream | 117606 | 7601218 ~ 7722757 (-) | False | ank3b |
| XM_034309161.1 | mRNA | downstream | 136571 | 7601218 ~ 7703792 (-) | False | ank3b |
| XM_034309107.1 | mRNA | upstream | 138096 | 7979556 ~ 7990069 (-) | False | egr2b |
| XM_026915476.2 | mRNA | upstream | 138603 | 7980063 ~ 7982977 (-) | True | egr2b |
| XM_026915091.2 | mRNA | upstream | 180074 | 8021534 ~ 8141060 (-) | False | jmjd1cb |
| XM_026915090.2 | mRNA | upstream | 180074 | 8021534 ~ 8141060 (-) | False | jmjd1cb |
| XM_026915092.2 | mRNA | upstream | 180074 | 8021534 ~ 8141058 (-) | False | jmjd1cb |
| XR_004579320.1 | other | downstream | 1245973 | 6548071 ~ 6594390 (-) | False | itga3b |
| TU226699 | other | downstream | 2064343 | 5768528 ~ 5776020 (-) | False | LOC113527291 |
| TU226617 | other | downstream | 2226409 | 5611120 ~ 5613954 (-) | True | G191430 |
| trnav-uac_7 | other | downstream | 2366893 | 5473398 ~ 5473470 (-) | True | trnav-uac_7 |
| trnai-uau_5 | other | downstream | 2538158 | 5302113 ~ 5302205 (-) | True | trnai-uau_5 |
| trnap-agg_9 | other | upstream | 616867 | 8458327 ~ 8458396 (-) | True | trnap-agg_9 |
| trnal-uag_3 | other | upstream | 633799 | 8475259 ~ 8475340 (-) | True | trnal-uag_3 |
| XR_004579166.1 | other | upstream | 1006202 | 8847662 ~ 8857748 (-) | False | si:dkey-94l16.4 |
| trnaa-ugc_6 | other | upstream | 1235329 | 9076789 ~ 9076860 (-) | True | trnaa-ugc_6 |
| trnal-uag_4 | other | upstream | 1235658 | 9077118 ~ 9077199 (-) | True | trnal-uag_4 |
