Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU228139 |
| length | 550 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G192685 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 8071922 ~ 8126557 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU228096 | lncRNA | downstream | 94768 | 7974214 ~ 7977154 (-) | True | G192665 |
| TU228097 | lncRNA | downstream | 94857 | 7974214 ~ 7977065 (-) | False | G192665 |
| TU228034 | lncRNA | downstream | 194223 | 7874766 ~ 7877699 (-) | True | G192611 |
| TU228005 | lncRNA | downstream | 229288 | 7842060 ~ 7842634 (-) | True | G192585 |
| TU228004 | lncRNA | downstream | 229975 | 7841629 ~ 7841947 (-) | True | G192584 |
| TU228380 | lncRNA | upstream | 252670 | 8379227 ~ 8383599 (-) | True | G192881 |
| TU228447 | lncRNA | upstream | 302747 | 8429304 ~ 8436084 (-) | True | G192937 |
| TU228459 | lncRNA | upstream | 325640 | 8452197 ~ 8455303 (-) | True | G192948 |
| TU228456 | lncRNA | upstream | 337752 | 8464309 ~ 8541281 (-) | True | G192945 |
| TU228465 | lncRNA | upstream | 353863 | 8480420 ~ 8513470 (-) | True | G192953 |
| XM_026915093.2 | mRNA | downstream | 7918 | 8021534 ~ 8064004 (-) | False | jmjd1cb |
| XM_034309107.1 | mRNA | downstream | 81853 | 7979556 ~ 7990069 (-) | False | egr2b |
| XM_026915476.2 | mRNA | downstream | 88945 | 7980063 ~ 7982977 (-) | True | egr2b |
| XM_026914587.2 | mRNA | downstream | 262156 | 7804520 ~ 7809766 (-) | True | tmem26b |
| XM_034309149.1 | mRNA | downstream | 389112 | 7601218 ~ 7682810 (-) | False | ank3b |
| XM_026915599.2 | mRNA | upstream | 71527 | 8198084 ~ 8201220 (-) | True | LOC113527613 |
| XM_026915598.2 | mRNA | upstream | 71530 | 8198087 ~ 8201212 (-) | False | LOC113527613 |
| XM_026915591.2 | mRNA | upstream | 81387 | 8207944 ~ 8261110 (-) | False | exoc6 |
| XM_026915590.2 | mRNA | upstream | 81387 | 8207944 ~ 8261110 (-) | False | exoc6 |
| XM_026915597.2 | mRNA | upstream | 81387 | 8207944 ~ 8259602 (-) | False | exoc6 |
| XR_004579320.1 | other | downstream | 1477532 | 6548071 ~ 6594390 (-) | False | itga3b |
| TU226699 | other | downstream | 2295902 | 5768528 ~ 5776020 (-) | False | LOC113527291 |
| TU226617 | other | downstream | 2457968 | 5611120 ~ 5613954 (-) | True | G191430 |
| trnav-uac_7 | other | downstream | 2598452 | 5473398 ~ 5473470 (-) | True | trnav-uac_7 |
| trnai-uau_5 | other | downstream | 2769717 | 5302113 ~ 5302205 (-) | True | trnai-uau_5 |
| trnap-agg_9 | other | upstream | 331770 | 8458327 ~ 8458396 (-) | True | trnap-agg_9 |
| trnal-uag_3 | other | upstream | 348702 | 8475259 ~ 8475340 (-) | True | trnal-uag_3 |
| XR_004579166.1 | other | upstream | 721105 | 8847662 ~ 8857748 (-) | False | si:dkey-94l16.4 |
| trnaa-ugc_6 | other | upstream | 950232 | 9076789 ~ 9076860 (-) | True | trnaa-ugc_6 |
| trnal-uag_4 | other | upstream | 950561 | 9077118 ~ 9077199 (-) | True | trnal-uag_4 |
