Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU228447 |
| length | 302 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G192937 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 8429304 ~ 8436084 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU228380 | lncRNA | downstream | 45705 | 8379227 ~ 8383599 (-) | True | G192881 |
| TU228139 | lncRNA | downstream | 302747 | 8071922 ~ 8126557 (-) | True | G192685 |
| TU228135 | lncRNA | downstream | 333947 | 8090685 ~ 8095357 (-) | True | G192681 |
| TU228096 | lncRNA | downstream | 452150 | 7974214 ~ 7977154 (-) | True | G192665 |
| TU228097 | lncRNA | downstream | 452239 | 7974214 ~ 7977065 (-) | False | G192665 |
| TU228459 | lncRNA | upstream | 16113 | 8452197 ~ 8455303 (-) | True | G192948 |
| TU228456 | lncRNA | upstream | 28225 | 8464309 ~ 8541281 (-) | True | G192945 |
| TU228465 | lncRNA | upstream | 44336 | 8480420 ~ 8513470 (-) | True | G192953 |
| TU228466 | lncRNA | upstream | 47524 | 8483608 ~ 8485178 (-) | True | G192954 |
| TU228680 | lncRNA | upstream | 491897 | 8927981 ~ 8928648 (-) | True | G193138 |
| XM_026914925.2 | mRNA | downstream | 126885 | 8301334 ~ 8302419 (-) | True | LOC113527290 |
| XM_026914611.2 | mRNA | downstream | 146442 | 8269591 ~ 8282862 (-) | True | adam8b |
| XM_026915594.2 | mRNA | downstream | 168194 | 8209345 ~ 8261110 (-) | False | exoc6 |
| XM_026915273.2 | mRNA | upstream | 4103 | 8440187 ~ 8445679 (-) | True | crym |
| XM_026915448.2 | mRNA | upstream | 11843 | 8447927 ~ 8450462 (-) | True | snu13b |
| XM_026914607.2 | mRNA | upstream | 78477 | 8514561 ~ 8521374 (-) | True | si:ch1073-272o11.3 |
| XM_026914608.2 | mRNA | upstream | 78477 | 8514561 ~ 8519798 (-) | False | si:ch1073-272o11.3 |
| XM_026915557.2 | mRNA | upstream | 238645 | 8674729 ~ 8678396 (-) | True | wfikkn2b |
| XR_004579320.1 | other | downstream | 1834914 | 6548071 ~ 6594390 (-) | False | itga3b |
| TU226699 | other | downstream | 2653284 | 5768528 ~ 5776020 (-) | False | LOC113527291 |
| TU226617 | other | downstream | 2815350 | 5611120 ~ 5613954 (-) | True | G191430 |
| trnav-uac_7 | other | downstream | 2955834 | 5473398 ~ 5473470 (-) | True | trnav-uac_7 |
| trnai-uau_5 | other | downstream | 3127099 | 5302113 ~ 5302205 (-) | True | trnai-uau_5 |
| trnap-agg_9 | other | upstream | 22243 | 8458327 ~ 8458396 (-) | True | trnap-agg_9 |
| trnal-uag_3 | other | upstream | 39175 | 8475259 ~ 8475340 (-) | True | trnal-uag_3 |
| XR_004579166.1 | other | upstream | 411578 | 8847662 ~ 8857748 (-) | False | si:dkey-94l16.4 |
| trnaa-ugc_6 | other | upstream | 640705 | 9076789 ~ 9076860 (-) | True | trnaa-ugc_6 |
| trnal-uag_4 | other | upstream | 641034 | 9077118 ~ 9077199 (-) | True | trnal-uag_4 |
