Item | Value |
---|---|
RNA id | TU228456 |
length | 384 |
lncRNA type | sense_over |
GC content | 0.37 |
exon number | 2 |
gene id | G192945 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047606.1 |
NCBI id | CM018552.1 |
chromosome length | 26563515 |
location | 8464309 ~ 8541281 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU228459 | lncRNA | downstream | 9006 | 8452197 ~ 8455303 (-) | True | G192948 |
TU228447 | lncRNA | downstream | 28225 | 8429304 ~ 8436084 (-) | True | G192937 |
TU228380 | lncRNA | downstream | 80710 | 8379227 ~ 8383599 (-) | True | G192881 |
TU228139 | lncRNA | downstream | 337752 | 8071922 ~ 8126557 (-) | True | G192685 |
TU228135 | lncRNA | downstream | 368952 | 8090685 ~ 8095357 (-) | True | G192681 |
TU228680 | lncRNA | upstream | 386700 | 8927981 ~ 8928648 (-) | True | G193138 |
TU228880 | lncRNA | upstream | 613161 | 9154442 ~ 9156287 (-) | True | G193315 |
TU228886 | lncRNA | upstream | 616910 | 9158191 ~ 9158569 (-) | True | G193319 |
TU228882 | lncRNA | upstream | 618153 | 9159434 ~ 9184089 (-) | True | G193316 |
TU228901 | lncRNA | upstream | 660711 | 9201992 ~ 9202672 (-) | True | G193334 |
XM_026915448.2 | mRNA | downstream | 13847 | 8447927 ~ 8450462 (-) | True | snu13b |
XM_026915273.2 | mRNA | downstream | 18630 | 8440187 ~ 8445679 (-) | True | crym |
XM_026914925.2 | mRNA | downstream | 161890 | 8301334 ~ 8302419 (-) | True | LOC113527290 |
XM_026914611.2 | mRNA | downstream | 181447 | 8269591 ~ 8282862 (-) | True | adam8b |
XM_026915595.2 | mRNA | downstream | 204707 | 8209345 ~ 8259602 (-) | False | exoc6 |
XM_026915557.2 | mRNA | upstream | 133448 | 8674729 ~ 8678396 (-) | True | wfikkn2b |
XM_026915886.2 | mRNA | upstream | 151978 | 8693259 ~ 8746106 (-) | True | abcc3 |
XM_026915887.2 | mRNA | upstream | 151978 | 8693259 ~ 8746106 (-) | False | abcc3 |
XM_026915888.2 | mRNA | upstream | 161230 | 8702511 ~ 8746106 (-) | False | abcc3 |
XM_026915323.2 | mRNA | upstream | 306381 | 8847662 ~ 8857748 (-) | True | si:dkey-94l16.4 |
trnap-agg_9 | other | downstream | 5913 | 8458327 ~ 8458396 (-) | True | trnap-agg_9 |
XR_004579320.1 | other | downstream | 1869919 | 6548071 ~ 6594390 (-) | False | itga3b |
TU226699 | other | downstream | 2688289 | 5768528 ~ 5776020 (-) | False | LOC113527291 |
TU226617 | other | downstream | 2850355 | 5611120 ~ 5613954 (-) | True | G191430 |
trnav-uac_7 | other | downstream | 2990839 | 5473398 ~ 5473470 (-) | True | trnav-uac_7 |
XR_004579166.1 | other | upstream | 306381 | 8847662 ~ 8857748 (-) | False | si:dkey-94l16.4 |
trnaa-ugc_6 | other | upstream | 535508 | 9076789 ~ 9076860 (-) | True | trnaa-ugc_6 |
trnal-uag_4 | other | upstream | 535837 | 9077118 ~ 9077199 (-) | True | trnal-uag_4 |
trnaf-aaa | other | upstream | 536285 | 9077566 ~ 9077647 (-) | True | trnaf-aaa |
trnaa-cgc_2 | other | upstream | 537705 | 9078986 ~ 9079057 (-) | True | trnaa-cgc_2 |