Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU229539 |
| length | 1160 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 3 |
| gene id | G193828 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 10324956 ~ 10336247 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU229556 | lncRNA | upstream | 98637 | 10224702 ~ 10226319 (+) | True | G193842 |
| XR_004579148.1 | lncRNA | upstream | 176170 | 10144353 ~ 10148786 (+) | True | LOC117598497 |
| TU229298 | lncRNA | upstream | 498092 | 9825427 ~ 9826864 (+) | True | G193646 |
| TU229297 | lncRNA | upstream | 500488 | 9824047 ~ 9824468 (+) | True | G193645 |
| TU229153 | lncRNA | upstream | 544001 | 9694909 ~ 9780955 (+) | True | G193544 |
| TU229537 | lncRNA | downstream | 2921 | 10332906 ~ 10336247 (+) | False | G193828 |
| TU229541 | lncRNA | downstream | 2921 | 10332906 ~ 10336247 (+) | False | G193828 |
| TU229700 | lncRNA | downstream | 20214 | 10350199 ~ 10350620 (+) | True | G193972 |
| TU229865 | lncRNA | downstream | 264244 | 10594229 ~ 10662463 (+) | True | G194091 |
| TU229853 | lncRNA | downstream | 314953 | 10644938 ~ 10646453 (+) | False | msrb1b |
| XM_026915721.2 | mRNA | upstream | 28433 | 10290457 ~ 10296523 (+) | True | rsph10b |
| XM_026915722.2 | mRNA | upstream | 28433 | 10290457 ~ 10296523 (+) | False | rsph10b |
| XM_026915377.2 | mRNA | upstream | 34540 | 10280686 ~ 10290416 (+) | True | pms2 |
| XM_026914923.2 | mRNA | upstream | 70319 | 10239770 ~ 10254637 (+) | True | cyth3a |
| XM_026914999.2 | mRNA | upstream | 110001 | 10201989 ~ 10214955 (+) | True | atad1b |
| XM_026915350.2 | mRNA | downstream | 25792 | 10355777 ~ 10359207 (+) | True | bhlha15 |
| XM_034309040.1 | mRNA | downstream | 87916 | 10417901 ~ 10486419 (+) | False | trrap |
| XM_034309042.1 | mRNA | downstream | 87916 | 10417901 ~ 10486419 (+) | False | trrap |
| XM_034309041.1 | mRNA | downstream | 88060 | 10418045 ~ 10486419 (+) | False | trrap |
| XM_026915821.2 | mRNA | downstream | 88899 | 10418884 ~ 10487467 (+) | True | trrap |
| trnal-aag_8 | other | upstream | 260330 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| XR_003402888.1 | other | upstream | 689889 | 9634877 ~ 9635067 (+) | True | LOC113527805 |
| trnaq-cug_15 | other | upstream | 811121 | 9513764 ~ 9513835 (+) | True | trnaq-cug_15 |
| trnaq-cug_14 | other | upstream | 812325 | 9512560 ~ 9512631 (+) | True | trnaq-cug_14 |
| trnaq-cug_13 | other | upstream | 812716 | 9512169 ~ 9512240 (+) | False | trnaq-cug_13 |
| trnaq-cug_16 | other | downstream | 956212 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| TU231182 | other | downstream | 2142698 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| XR_004579176.1 | other | downstream | 3153316 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | downstream | 3153316 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU234137 | other | downstream | 6525785 | 16855770 ~ 16863495 (+) | False | anapc16 |
