Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU229857 |
| length | 1010 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G194087 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 10659878 ~ 10660950 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU229853 | lncRNA | upstream | 13425 | 10644938 ~ 10646453 (+) | False | msrb1b |
| TU229700 | lncRNA | upstream | 309258 | 10350199 ~ 10350620 (+) | True | G193972 |
| TU229536 | lncRNA | upstream | 323631 | 10325640 ~ 10336247 (+) | True | G193828 |
| TU229537 | lncRNA | upstream | 323631 | 10332906 ~ 10336247 (+) | False | G193828 |
| TU229541 | lncRNA | upstream | 323631 | 10332906 ~ 10336247 (+) | False | G193828 |
| TU229892 | lncRNA | downstream | 50371 | 10711321 ~ 10712015 (+) | True | G194113 |
| TU230004 | lncRNA | downstream | 119713 | 10780663 ~ 10780884 (+) | True | G194201 |
| XR_003402886.1 | lncRNA | downstream | 127817 | 10788767 ~ 10790017 (+) | True | LOC113527761 |
| TU230092 | lncRNA | downstream | 304000 | 10964950 ~ 10965617 (+) | True | G194276 |
| TU230097 | lncRNA | downstream | 304688 | 10965638 ~ 10968033 (+) | True | G194278 |
| XM_026915079.2 | mRNA | upstream | 4846 | 10651288 ~ 10655032 (+) | True | mlst8 |
| XM_026915072.2 | mRNA | upstream | 8517 | 10647273 ~ 10651361 (+) | True | meiob |
| XM_026915075.2 | mRNA | upstream | 8517 | 10647273 ~ 10651361 (+) | False | meiob |
| XM_026915074.2 | mRNA | upstream | 8517 | 10647273 ~ 10651361 (+) | False | meiob |
| XM_026915073.2 | mRNA | upstream | 8517 | 10647273 ~ 10651361 (+) | False | meiob |
| XM_026915965.2 | mRNA | downstream | 8230 | 10669180 ~ 10690023 (+) | False | grid2ipb |
| XM_026915961.2 | mRNA | downstream | 8231 | 10669181 ~ 10690023 (+) | True | grid2ipb |
| XM_026915962.2 | mRNA | downstream | 8231 | 10669181 ~ 10690023 (+) | False | grid2ipb |
| XM_026915348.2 | mRNA | downstream | 29598 | 10690548 ~ 10693499 (+) | True | LOC113527483 |
| XM_026914588.2 | mRNA | downstream | 52864 | 10713814 ~ 10720682 (+) | False | lcmt1 |
| trnal-aag_8 | other | upstream | 595252 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| XR_003402888.1 | other | upstream | 1024811 | 9634877 ~ 9635067 (+) | True | LOC113527805 |
| trnaq-cug_15 | other | upstream | 1146043 | 9513764 ~ 9513835 (+) | True | trnaq-cug_15 |
| trnaq-cug_14 | other | upstream | 1147247 | 9512560 ~ 9512631 (+) | True | trnaq-cug_14 |
| trnaq-cug_13 | other | upstream | 1147638 | 9512169 ~ 9512240 (+) | False | trnaq-cug_13 |
| trnaq-cug_16 | other | downstream | 625247 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| TU231182 | other | downstream | 1811733 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| XR_004579176.1 | other | downstream | 2822351 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | downstream | 2822351 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU234137 | other | downstream | 6194820 | 16855770 ~ 16863495 (+) | False | anapc16 |
