Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU229865 |
| length | 807 |
| lncRNA type | read_through |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G194091 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 10594229 ~ 10662463 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU229700 | lncRNA | upstream | 243609 | 10350199 ~ 10350620 (+) | True | G193972 |
| TU229536 | lncRNA | upstream | 257982 | 10325640 ~ 10336247 (+) | True | G193828 |
| TU229537 | lncRNA | upstream | 257982 | 10332906 ~ 10336247 (+) | False | G193828 |
| TU229541 | lncRNA | upstream | 257982 | 10332906 ~ 10336247 (+) | False | G193828 |
| TU229539 | lncRNA | upstream | 264244 | 10324956 ~ 10329985 (+) | False | G193828 |
| TU229892 | lncRNA | downstream | 48858 | 10711321 ~ 10712015 (+) | True | G194113 |
| TU230004 | lncRNA | downstream | 118200 | 10780663 ~ 10780884 (+) | True | G194201 |
| XR_003402886.1 | lncRNA | downstream | 126304 | 10788767 ~ 10790017 (+) | True | LOC113527761 |
| TU230092 | lncRNA | downstream | 302487 | 10964950 ~ 10965617 (+) | True | G194276 |
| TU230097 | lncRNA | downstream | 303175 | 10965638 ~ 10968033 (+) | True | G194278 |
| XM_026915794.2 | mRNA | upstream | 24540 | 10567499 ~ 10569689 (+) | True | foxl3 |
| XM_026915305.2 | mRNA | upstream | 29479 | 10532417 ~ 10564750 (+) | True | fam20cb |
| XM_026915821.2 | mRNA | upstream | 106762 | 10418884 ~ 10487467 (+) | True | trrap |
| XM_034309040.1 | mRNA | upstream | 107810 | 10417901 ~ 10486419 (+) | False | trrap |
| XM_034309042.1 | mRNA | upstream | 107810 | 10417901 ~ 10486419 (+) | False | trrap |
| XM_026915965.2 | mRNA | downstream | 6717 | 10669180 ~ 10690023 (+) | False | grid2ipb |
| XM_026915961.2 | mRNA | downstream | 6718 | 10669181 ~ 10690023 (+) | True | grid2ipb |
| XM_026915962.2 | mRNA | downstream | 6718 | 10669181 ~ 10690023 (+) | False | grid2ipb |
| XM_026915348.2 | mRNA | downstream | 28085 | 10690548 ~ 10693499 (+) | True | LOC113527483 |
| XM_026914588.2 | mRNA | downstream | 51351 | 10713814 ~ 10720682 (+) | False | lcmt1 |
| trnal-aag_8 | other | upstream | 529603 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| XR_003402888.1 | other | upstream | 959162 | 9634877 ~ 9635067 (+) | True | LOC113527805 |
| trnaq-cug_15 | other | upstream | 1080394 | 9513764 ~ 9513835 (+) | True | trnaq-cug_15 |
| trnaq-cug_14 | other | upstream | 1081598 | 9512560 ~ 9512631 (+) | True | trnaq-cug_14 |
| trnaq-cug_13 | other | upstream | 1081989 | 9512169 ~ 9512240 (+) | False | trnaq-cug_13 |
| trnaq-cug_16 | other | downstream | 623734 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| TU231182 | other | downstream | 1810220 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| XR_004579176.1 | other | downstream | 2820838 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | downstream | 2820838 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU234137 | other | downstream | 6193307 | 16855770 ~ 16863495 (+) | False | anapc16 |
