Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU230183 |
| length | 360 |
| lncRNA type | read_through |
| GC content | 0.63 |
| exon number | 2 |
| gene id | G194360 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 11135232 ~ 11206976 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU230204 | lncRNA | upstream | 14682 | 11120318 ~ 11120550 (+) | True | G194380 |
| TU230113 | lncRNA | upstream | 39054 | 11093163 ~ 11096178 (+) | True | G194293 |
| TU230188 | lncRNA | upstream | 71550 | 11062164 ~ 11063682 (+) | True | G194365 |
| TU230097 | lncRNA | upstream | 167199 | 10965638 ~ 10968033 (+) | True | G194278 |
| TU230092 | lncRNA | upstream | 169615 | 10964950 ~ 10965617 (+) | True | G194276 |
| TU230242 | lncRNA | downstream | 40787 | 11247763 ~ 11248107 (+) | False | si:ch73-139e5.4 |
| TU230438 | lncRNA | downstream | 171485 | 11378461 ~ 11379190 (+) | True | G194571 |
| TU230527 | lncRNA | downstream | 385916 | 11592892 ~ 11593091 (+) | True | G194627 |
| TU230523 | lncRNA | downstream | 390554 | 11597530 ~ 11602441 (+) | True | G194623 |
| TU230532 | lncRNA | downstream | 407413 | 11614389 ~ 11621269 (+) | True | tmem106a |
| XM_026915656.2 | mRNA | upstream | 34729 | 11096965 ~ 11100503 (+) | False | maff |
| XM_026915654.2 | mRNA | upstream | 34729 | 11097033 ~ 11100503 (+) | True | maff |
| XM_026915655.2 | mRNA | upstream | 34729 | 11097218 ~ 11100503 (+) | False | maff |
| XM_026915487.2 | mRNA | upstream | 197353 | 10912118 ~ 10937879 (+) | True | shisa9a |
| XM_026915270.2 | mRNA | downstream | 9266 | 11216242 ~ 11225898 (+) | True | aco2 |
| XM_034309083.1 | mRNA | downstream | 20769 | 11227745 ~ 11231747 (+) | False | csdc2a |
| XM_026914744.2 | mRNA | downstream | 20771 | 11227747 ~ 11231747 (+) | True | csdc2a |
| XM_026914747.2 | mRNA | downstream | 20771 | 11227747 ~ 11231747 (+) | False | csdc2a |
| XM_026914743.2 | mRNA | downstream | 21170 | 11228146 ~ 11231747 (+) | False | csdc2a |
| trnal-aag_8 | other | upstream | 1070606 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| XR_003402888.1 | other | upstream | 1500165 | 9634877 ~ 9635067 (+) | True | LOC113527805 |
| trnaq-cug_15 | other | upstream | 1621397 | 9513764 ~ 9513835 (+) | True | trnaq-cug_15 |
| trnaq-cug_14 | other | upstream | 1622601 | 9512560 ~ 9512631 (+) | True | trnaq-cug_14 |
| trnaq-cug_13 | other | upstream | 1622992 | 9512169 ~ 9512240 (+) | False | trnaq-cug_13 |
| trnaq-cug_16 | other | downstream | 79221 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| TU231182 | other | downstream | 1265707 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| XR_004579176.1 | other | downstream | 2276325 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | downstream | 2276325 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU234137 | other | downstream | 5648794 | 16855770 ~ 16863495 (+) | False | anapc16 |
