Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU230438 |
| length | 709 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G194571 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 11378461 ~ 11379190 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU230242 | lncRNA | upstream | 130354 | 11247763 ~ 11248107 (+) | False | si:ch73-139e5.4 |
| TU230183 | lncRNA | upstream | 171485 | 11135232 ~ 11206976 (+) | True | G194360 |
| TU230204 | lncRNA | upstream | 257911 | 11120318 ~ 11120550 (+) | True | G194380 |
| TU230113 | lncRNA | upstream | 282283 | 11093163 ~ 11096178 (+) | True | G194293 |
| TU230188 | lncRNA | upstream | 314779 | 11062164 ~ 11063682 (+) | True | G194365 |
| TU230527 | lncRNA | downstream | 213702 | 11592892 ~ 11593091 (+) | True | G194627 |
| TU230523 | lncRNA | downstream | 218340 | 11597530 ~ 11602441 (+) | True | G194623 |
| TU230532 | lncRNA | downstream | 235199 | 11614389 ~ 11621269 (+) | True | tmem106a |
| TU230688 | lncRNA | downstream | 339707 | 11718897 ~ 11719113 (+) | True | G194748 |
| TU230779 | lncRNA | downstream | 659313 | 12038503 ~ 12038728 (+) | True | G194828 |
| XM_026914507.2 | mRNA | upstream | 4193 | 11355205 ~ 11374268 (+) | True | shisa8b |
| XM_026914508.2 | mRNA | upstream | 4193 | 11355205 ~ 11374268 (+) | False | shisa8b |
| XM_026914509.2 | mRNA | upstream | 4193 | 11355205 ~ 11374268 (+) | False | shisa8b |
| XM_026915301.2 | mRNA | upstream | 35377 | 11339017 ~ 11343084 (+) | True | desi1b |
| XM_026914597.2 | mRNA | upstream | 63824 | 11291053 ~ 11314637 (+) | True | ep300a |
| XM_026915267.2 | mRNA | downstream | 34938 | 11414128 ~ 11420071 (+) | True | gna13a |
| XM_026915062.2 | mRNA | downstream | 41963 | 11421153 ~ 11424736 (+) | True | LOC113527352 |
| XM_026915061.2 | mRNA | downstream | 41963 | 11421153 ~ 11424736 (+) | False | LOC113527352 |
| XM_026915057.2 | mRNA | downstream | 52731 | 11431921 ~ 11439228 (+) | False | arsg |
| XM_026915056.2 | mRNA | downstream | 53986 | 11433176 ~ 11439228 (+) | False | arsg |
| trnaq-cug_16 | other | upstream | 92193 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| trnal-aag_8 | other | upstream | 1313835 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| XR_003402888.1 | other | upstream | 1743394 | 9634877 ~ 9635067 (+) | True | LOC113527805 |
| trnaq-cug_15 | other | upstream | 1864626 | 9513764 ~ 9513835 (+) | True | trnaq-cug_15 |
| trnaq-cug_14 | other | upstream | 1865830 | 9512560 ~ 9512631 (+) | True | trnaq-cug_14 |
| TU231182 | other | downstream | 1093493 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| XR_004579176.1 | other | downstream | 2104111 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | downstream | 2104111 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU234137 | other | downstream | 5476580 | 16855770 ~ 16863495 (+) | False | anapc16 |
| trnai-uau_6 | other | downstream | 6198093 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
