Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU230688 |
| length | 217 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G194748 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 11718897 ~ 11719113 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU230532 | lncRNA | upstream | 97628 | 11614389 ~ 11621269 (+) | True | tmem106a |
| TU230523 | lncRNA | upstream | 116456 | 11597530 ~ 11602441 (+) | True | G194623 |
| TU230527 | lncRNA | upstream | 125806 | 11592892 ~ 11593091 (+) | True | G194627 |
| TU230438 | lncRNA | upstream | 339707 | 11378461 ~ 11379190 (+) | True | G194571 |
| TU230242 | lncRNA | upstream | 470790 | 11247763 ~ 11248107 (+) | False | si:ch73-139e5.4 |
| TU230779 | lncRNA | downstream | 319390 | 12038503 ~ 12038728 (+) | True | G194828 |
| TU230784 | lncRNA | downstream | 343722 | 12062835 ~ 12063498 (+) | False | LOC113527436 |
| TU230950 | lncRNA | downstream | 420899 | 12140012 ~ 12140220 (+) | True | G194989 |
| TU230966 | lncRNA | downstream | 425888 | 12145001 ~ 12145207 (+) | True | G195002 |
| TU230980 | lncRNA | downstream | 455281 | 12174394 ~ 12176119 (+) | True | G195016 |
| XM_026914515.2 | mRNA | upstream | 49451 | 11664117 ~ 11669446 (+) | True | sost |
| XM_026915706.2 | mRNA | upstream | 63047 | 11645860 ~ 11655850 (+) | True | dusp3a |
| XM_026915004.2 | mRNA | upstream | 91333 | 11624596 ~ 11627564 (+) | True | arl4d |
| XM_026915002.2 | mRNA | upstream | 98991 | 11613899 ~ 11619906 (+) | False | tmem106a |
| XM_034309334.1 | mRNA | upstream | 98991 | 11614441 ~ 11619906 (+) | False | tmem106a |
| XM_026915440.2 | mRNA | downstream | 6290 | 11725403 ~ 11731988 (+) | True | meox1 |
| XM_026914526.2 | mRNA | downstream | 40868 | 11759981 ~ 11783433 (+) | False | etv4 |
| XM_026914525.2 | mRNA | downstream | 40877 | 11759990 ~ 11783433 (+) | False | etv4 |
| XM_026914527.2 | mRNA | downstream | 41024 | 11760137 ~ 11783433 (+) | False | etv4 |
| XM_026914528.2 | mRNA | downstream | 41498 | 11760611 ~ 11783433 (+) | False | etv4 |
| trnaq-cug_16 | other | upstream | 432629 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| trnal-aag_8 | other | upstream | 1654271 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| XR_003402888.1 | other | upstream | 2083830 | 9634877 ~ 9635067 (+) | True | LOC113527805 |
| trnaq-cug_15 | other | upstream | 2205062 | 9513764 ~ 9513835 (+) | True | trnaq-cug_15 |
| trnaq-cug_14 | other | upstream | 2206266 | 9512560 ~ 9512631 (+) | True | trnaq-cug_14 |
| TU231182 | other | downstream | 753570 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| XR_004579176.1 | other | downstream | 1764188 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | downstream | 1764188 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU234137 | other | downstream | 5136657 | 16855770 ~ 16863495 (+) | False | anapc16 |
| trnai-uau_6 | other | downstream | 5858170 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
