Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU231182 |
| length | 804 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 2 |
| gene id | LOC113527673 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 12472679 ~ 12473983 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579205.1 | lncRNA | upstream | 19005 | 12451893 ~ 12453678 (+) | True | LOC117598562 |
| TU231049 | lncRNA | upstream | 98403 | 12374010 ~ 12374280 (+) | True | G195084 |
| TU231048 | lncRNA | upstream | 101398 | 12371056 ~ 12371285 (+) | True | G195083 |
| TU231012 | lncRNA | upstream | 222928 | 12249060 ~ 12249755 (+) | True | G195047 |
| TU230980 | lncRNA | upstream | 296564 | 12174394 ~ 12176119 (+) | True | G195016 |
| TU231214 | lncRNA | downstream | 76395 | 12550134 ~ 12550360 (+) | True | G195225 |
| TU231292 | lncRNA | downstream | 169529 | 12643268 ~ 12643526 (+) | True | G195287 |
| TU231306 | lncRNA | downstream | 184366 | 12658105 ~ 12658323 (+) | True | G195301 |
| TU231526 | lncRNA | downstream | 370586 | 12844325 ~ 12844561 (+) | True | G195512 |
| TU231613 | lncRNA | downstream | 485201 | 12958940 ~ 12963243 (+) | False | ablim1b |
| XM_034309502.1 | mRNA | upstream | 4499 | 12466585 ~ 12468184 (+) | True | LOC117598642 |
| XM_026915683.2 | mRNA | upstream | 6249 | 12462862 ~ 12466434 (+) | False | znf668 |
| XM_034309353.1 | mRNA | upstream | 6249 | 12463111 ~ 12466434 (+) | True | znf668 |
| XM_026915424.2 | mRNA | upstream | 25687 | 12434535 ~ 12446996 (+) | False | rnf40 |
| XM_026915425.2 | mRNA | upstream | 25687 | 12434631 ~ 12446996 (+) | True | rnf40 |
| XM_034309533.1 | mRNA | downstream | 10395 | 12484134 ~ 12487553 (+) | True | si:rp71-1c10.8 |
| XM_026914610.2 | mRNA | downstream | 10395 | 12484134 ~ 12487553 (+) | False | si:rp71-1c10.8 |
| XM_034309464.1 | mRNA | downstream | 21929 | 12495668 ~ 12502869 (+) | True | valopb |
| XM_026914694.2 | mRNA | downstream | 49196 | 12522935 ~ 12544716 (+) | True | gabrz |
| XM_026914691.2 | mRNA | downstream | 89758 | 12563497 ~ 12575544 (+) | True | adgra1a |
| trnaq-cug_16 | other | upstream | 1186415 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| trnal-aag_8 | other | upstream | 2408057 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| XR_003402888.1 | other | upstream | 2837616 | 9634877 ~ 9635067 (+) | True | LOC113527805 |
| trnaq-cug_15 | other | upstream | 2958848 | 9513764 ~ 9513835 (+) | True | trnaq-cug_15 |
| trnaq-cug_14 | other | upstream | 2960052 | 9512560 ~ 9512631 (+) | True | trnaq-cug_14 |
| XR_004579176.1 | other | downstream | 1009562 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | downstream | 1009562 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU234137 | other | downstream | 4382031 | 16855770 ~ 16863495 (+) | False | anapc16 |
| trnai-uau_6 | other | downstream | 5103544 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
| TU234778 | other | downstream | 5681412 | 18155151 ~ 18158629 (+) | False | pde6gb |
