Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU231214 |
| length | 227 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G195225 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 12550134 ~ 12550360 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579205.1 | lncRNA | upstream | 96456 | 12451893 ~ 12453678 (+) | True | LOC117598562 |
| TU231049 | lncRNA | upstream | 175854 | 12374010 ~ 12374280 (+) | True | G195084 |
| TU231048 | lncRNA | upstream | 178849 | 12371056 ~ 12371285 (+) | True | G195083 |
| TU231012 | lncRNA | upstream | 300379 | 12249060 ~ 12249755 (+) | True | G195047 |
| TU230980 | lncRNA | upstream | 374015 | 12174394 ~ 12176119 (+) | True | G195016 |
| TU231292 | lncRNA | downstream | 92908 | 12643268 ~ 12643526 (+) | True | G195287 |
| TU231306 | lncRNA | downstream | 107745 | 12658105 ~ 12658323 (+) | True | G195301 |
| TU231526 | lncRNA | downstream | 293965 | 12844325 ~ 12844561 (+) | True | G195512 |
| TU231613 | lncRNA | downstream | 408580 | 12958940 ~ 12963243 (+) | False | ablim1b |
| XR_003402861.2 | lncRNA | downstream | 513504 | 13063864 ~ 13066622 (+) | True | LOC113527319 |
| XM_026914694.2 | mRNA | upstream | 5418 | 12522935 ~ 12544716 (+) | True | gabrz |
| XM_034309464.1 | mRNA | upstream | 47265 | 12495668 ~ 12502869 (+) | True | valopb |
| XM_034309533.1 | mRNA | upstream | 62581 | 12484134 ~ 12487553 (+) | True | si:rp71-1c10.8 |
| XM_026914610.2 | mRNA | upstream | 62581 | 12484134 ~ 12487553 (+) | False | si:rp71-1c10.8 |
| XM_026915699.2 | mRNA | upstream | 76151 | 12472679 ~ 12473983 (+) | True | LOC113527673 |
| XM_026914691.2 | mRNA | downstream | 13137 | 12563497 ~ 12575544 (+) | True | adgra1a |
| XM_026914693.2 | mRNA | downstream | 20918 | 12571278 ~ 12575544 (+) | False | adgra1a |
| XM_026914692.2 | mRNA | downstream | 21045 | 12571405 ~ 12575544 (+) | False | adgra1a |
| XM_026915779.2 | mRNA | downstream | 44135 | 12594495 ~ 12596222 (+) | True | mxtx2 |
| XM_026915462.2 | mRNA | downstream | 46013 | 12596373 ~ 12615218 (+) | True | bms1 |
| TU231182 | other | upstream | 76395 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| trnaq-cug_16 | other | upstream | 1263866 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| trnal-aag_8 | other | upstream | 2485508 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| XR_003402888.1 | other | upstream | 2915067 | 9634877 ~ 9635067 (+) | True | LOC113527805 |
| trnaq-cug_15 | other | upstream | 3036299 | 9513764 ~ 9513835 (+) | True | trnaq-cug_15 |
| XR_004579176.1 | other | downstream | 932941 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | downstream | 932941 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU234137 | other | downstream | 4305410 | 16855770 ~ 16863495 (+) | False | anapc16 |
| trnai-uau_6 | other | downstream | 5026923 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
| TU234778 | other | downstream | 5604791 | 18155151 ~ 18158629 (+) | False | pde6gb |
