Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU231613 |
| length | 724 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 2 |
| gene id | ablim1b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 12958935 ~ 13021995 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU231526 | lncRNA | upstream | 114379 | 12844325 ~ 12844561 (+) | True | G195512 |
| TU231306 | lncRNA | upstream | 300617 | 12658105 ~ 12658323 (+) | True | G195301 |
| TU231292 | lncRNA | upstream | 315414 | 12643268 ~ 12643526 (+) | True | G195287 |
| TU231214 | lncRNA | upstream | 408580 | 12550134 ~ 12550360 (+) | True | G195225 |
| XR_004579205.1 | lncRNA | upstream | 505262 | 12451893 ~ 12453678 (+) | True | LOC117598562 |
| XR_003402861.2 | lncRNA | downstream | 100621 | 13063864 ~ 13066622 (+) | True | LOC113527319 |
| TU231926 | lncRNA | downstream | 503522 | 13466765 ~ 13466983 (+) | True | G195839 |
| TU231948 | lncRNA | downstream | 551433 | 13514676 ~ 13517886 (+) | True | G195847 |
| TU231960 | lncRNA | downstream | 655421 | 13618664 ~ 13618939 (+) | True | G195857 |
| TU232108 | lncRNA | downstream | 730472 | 13693715 ~ 13695761 (+) | True | G195994 |
| XM_026914748.2 | mRNA | upstream | 121557 | 12811647 ~ 12837383 (+) | True | gfra1b |
| XM_026915462.2 | mRNA | upstream | 343722 | 12596373 ~ 12615218 (+) | True | bms1 |
| XM_026915779.2 | mRNA | upstream | 362718 | 12594495 ~ 12596222 (+) | True | mxtx2 |
| XM_026914693.2 | mRNA | upstream | 383396 | 12571278 ~ 12575544 (+) | False | adgra1a |
| XM_026915730.2 | mRNA | downstream | 15792 | 12979035 ~ 13021995 (+) | False | ablim1b |
| XM_026915724.2 | mRNA | downstream | 15793 | 12979036 ~ 13021995 (+) | True | ablim1b |
| XM_026915725.2 | mRNA | downstream | 15793 | 12979036 ~ 13021995 (+) | False | ablim1b |
| XM_026915735.2 | mRNA | downstream | 15793 | 12979036 ~ 13021995 (+) | False | ablim1b |
| XM_026915736.2 | mRNA | downstream | 15793 | 12979036 ~ 13021995 (+) | False | ablim1b |
| TU231182 | other | upstream | 485201 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| trnaq-cug_16 | other | upstream | 1672672 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| trnal-aag_8 | other | upstream | 2894314 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| XR_003402888.1 | other | upstream | 3323873 | 9634877 ~ 9635067 (+) | True | LOC113527805 |
| trnaq-cug_15 | other | upstream | 3445105 | 9513764 ~ 9513835 (+) | True | trnaq-cug_15 |
| XR_004579176.1 | other | downstream | 520058 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | downstream | 520058 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU234137 | other | downstream | 3892527 | 16855770 ~ 16863495 (+) | False | anapc16 |
| trnai-uau_6 | other | downstream | 4614040 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
| TU234778 | other | downstream | 5191908 | 18155151 ~ 18158629 (+) | False | pde6gb |
