Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU232344 |
| length | 870 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 2 |
| gene id | tha1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 14013573 ~ 14034143 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU232108 | lncRNA | upstream | 317812 | 13693715 ~ 13695761 (+) | True | G195994 |
| TU231960 | lncRNA | upstream | 394634 | 13618664 ~ 13618939 (+) | True | G195857 |
| TU231948 | lncRNA | upstream | 495687 | 13514676 ~ 13517886 (+) | True | G195847 |
| TU231926 | lncRNA | upstream | 546590 | 13466765 ~ 13466983 (+) | True | G195839 |
| XR_003402861.2 | lncRNA | upstream | 946951 | 13063864 ~ 13066622 (+) | True | LOC113527319 |
| TU232348 | lncRNA | downstream | 7340 | 14023587 ~ 14043932 (+) | True | G196202 |
| TU232423 | lncRNA | downstream | 110271 | 14126518 ~ 14127031 (+) | True | G196265 |
| TU232451 | lncRNA | downstream | 147324 | 14163571 ~ 14166015 (+) | True | G196289 |
| TU232454 | lncRNA | downstream | 153061 | 14169308 ~ 14169812 (+) | True | G196292 |
| TU232453 | lncRNA | downstream | 157043 | 14173290 ~ 14173773 (+) | True | G196291 |
| XM_026915894.2 | mRNA | upstream | 17404 | 13992223 ~ 13996169 (+) | True | socs3b |
| XM_034309193.1 | mRNA | upstream | 38980 | 13933904 ~ 13974593 (+) | True | LOC113527468 |
| XM_026915312.2 | mRNA | upstream | 38980 | 13946147 ~ 13974593 (+) | False | LOC113527468 |
| XM_034309192.1 | mRNA | upstream | 38980 | 13949217 ~ 13974593 (+) | False | LOC113527468 |
| XM_034309191.1 | mRNA | upstream | 38980 | 13949217 ~ 13974593 (+) | False | LOC113527468 |
| XM_026914595.2 | mRNA | downstream | 6329 | 14022576 ~ 14034143 (+) | True | tha1 |
| XM_026915931.2 | mRNA | downstream | 192652 | 14208899 ~ 14233287 (+) | True | slc38a10 |
| XM_026915204.2 | mRNA | downstream | 221145 | 14237392 ~ 14246149 (+) | True | tepsin |
| XM_026915135.2 | mRNA | downstream | 234218 | 14250465 ~ 14253655 (+) | True | si:dkey-21c1.4 |
| XM_034309504.1 | mRNA | downstream | 234218 | 14250465 ~ 14253655 (+) | False | si:dkey-21c1.4 |
| XR_004579176.1 | other | upstream | 455060 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | upstream | 455144 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU231182 | other | upstream | 1539834 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| trnaq-cug_16 | other | upstream | 2727305 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| trnal-aag_8 | other | upstream | 3948947 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| TU234137 | other | downstream | 2839523 | 16855770 ~ 16863495 (+) | False | anapc16 |
| trnai-uau_6 | other | downstream | 3561036 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
| TU234778 | other | downstream | 4138904 | 18155151 ~ 18158629 (+) | False | pde6gb |
| TU235296 | other | downstream | 4425639 | 18441886 ~ 18510159 (+) | True | G198737 |
| XR_004579138.1 | other | downstream | 4789838 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |
