Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU232565 |
| length | 1139 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G196386 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 14597778 ~ 14601439 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU232554 | lncRNA | upstream | 19320 | 14577906 ~ 14578458 (+) | True | G196378 |
| TU232527 | lncRNA | upstream | 71695 | 14523905 ~ 14526083 (+) | True | G196360 |
| TU232482 | lncRNA | upstream | 259508 | 14337963 ~ 14338270 (+) | True | G196315 |
| TU232479 | lncRNA | upstream | 270418 | 14327102 ~ 14327360 (+) | True | G196312 |
| TU232442 | lncRNA | upstream | 273497 | 14287359 ~ 14324281 (+) | True | qki2 |
| TU232571 | lncRNA | downstream | 3864 | 14605303 ~ 14614460 (+) | False | G196387 |
| TU232573 | lncRNA | downstream | 10854 | 14612293 ~ 14614657 (+) | True | G196387 |
| TU232568 | lncRNA | downstream | 11649 | 14613088 ~ 14614460 (+) | False | G196387 |
| TU232570 | lncRNA | downstream | 11649 | 14613088 ~ 14614657 (+) | False | G196387 |
| TU232567 | lncRNA | downstream | 11850 | 14613289 ~ 14614460 (+) | False | G196387 |
| XM_026915526.2 | mRNA | upstream | 20107 | 14571593 ~ 14577671 (+) | True | tap2t |
| XM_026915525.2 | mRNA | upstream | 20107 | 14571593 ~ 14577671 (+) | False | tap2t |
| XM_026915812.2 | mRNA | upstream | 27489 | 14560553 ~ 14570289 (+) | True | slc16a5a |
| XM_026915527.2 | mRNA | upstream | 38853 | 14547948 ~ 14558925 (+) | True | kctd2 |
| XM_034309207.1 | mRNA | upstream | 50902 | 14540535 ~ 14546876 (+) | True | hexdc |
| XM_034309495.1 | mRNA | downstream | 110891 | 14712330 ~ 14736267 (+) | True | stxbp4 |
| XM_026915935.2 | mRNA | downstream | 136817 | 14738256 ~ 14744868 (+) | True | hlfb |
| XM_034309578.1 | mRNA | downstream | 154189 | 14755628 ~ 14823551 (+) | True | ankfn1 |
| XM_026915545.2 | mRNA | downstream | 223796 | 14825235 ~ 14826880 (+) | True | nog3 |
| XM_034309224.1 | mRNA | downstream | 291785 | 14893224 ~ 15213205 (+) | False | rbfox3a |
| XR_004579176.1 | other | upstream | 1039265 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | upstream | 1039349 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU231182 | other | upstream | 2124039 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| trnaq-cug_16 | other | upstream | 3311510 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| trnal-aag_8 | other | upstream | 4533152 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
| TU234137 | other | downstream | 2254331 | 16855770 ~ 16863495 (+) | False | anapc16 |
| trnai-uau_6 | other | downstream | 2975844 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
| TU234778 | other | downstream | 3553712 | 18155151 ~ 18158629 (+) | False | pde6gb |
| TU235296 | other | downstream | 3840447 | 18441886 ~ 18510159 (+) | True | G198737 |
| XR_004579138.1 | other | downstream | 4204646 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |
