Item | Value |
---|---|
RNA id | TU232568 |
length | 933 |
lncRNA type | inter_gene |
GC content | 0.41 |
exon number | 2 |
gene id | G196387 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047606.1 |
NCBI id | CM018552.1 |
chromosome length | 26563515 |
location | 14605303 ~ 14614657 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU232565 | lncRNA | upstream | 11649 | 14597778 ~ 14601439 (+) | True | G196386 |
TU232554 | lncRNA | upstream | 34630 | 14577906 ~ 14578458 (+) | True | G196378 |
TU232527 | lncRNA | upstream | 87005 | 14523905 ~ 14526083 (+) | True | G196360 |
TU232482 | lncRNA | upstream | 274818 | 14337963 ~ 14338270 (+) | True | G196315 |
TU232479 | lncRNA | upstream | 285728 | 14327102 ~ 14327360 (+) | True | G196312 |
TU233452 | lncRNA | downstream | 652839 | 15267299 ~ 15268740 (+) | True | G197174 |
TU233737 | lncRNA | downstream | 1090672 | 15705132 ~ 15714087 (+) | True | G197397 |
TU233741 | lncRNA | downstream | 1107135 | 15721595 ~ 15722402 (+) | True | G197399 |
TU233783 | lncRNA | downstream | 1239474 | 15853934 ~ 15856543 (+) | True | G197434 |
TU233857 | lncRNA | downstream | 1431843 | 16046303 ~ 16046505 (+) | True | G197498 |
XM_026915271.2 | mRNA | upstream | 3163 | 14587265 ~ 14609925 (+) | True | acsf2 |
XM_026915526.2 | mRNA | upstream | 35417 | 14571593 ~ 14577671 (+) | True | tap2t |
XM_026915525.2 | mRNA | upstream | 35417 | 14571593 ~ 14577671 (+) | False | tap2t |
XM_026915812.2 | mRNA | upstream | 42799 | 14560553 ~ 14570289 (+) | True | slc16a5a |
XM_026915527.2 | mRNA | upstream | 54163 | 14547948 ~ 14558925 (+) | True | kctd2 |
XM_034309495.1 | mRNA | downstream | 97870 | 14712330 ~ 14736267 (+) | True | stxbp4 |
XM_026915935.2 | mRNA | downstream | 123796 | 14738256 ~ 14744868 (+) | True | hlfb |
XM_034309578.1 | mRNA | downstream | 141168 | 14755628 ~ 14823551 (+) | True | ankfn1 |
XM_026915545.2 | mRNA | downstream | 210775 | 14825235 ~ 14826880 (+) | True | nog3 |
XM_034309224.1 | mRNA | downstream | 278764 | 14893224 ~ 15213205 (+) | False | rbfox3a |
XR_004579176.1 | other | upstream | 1054575 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
XR_004579175.1 | other | upstream | 1054659 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
TU231182 | other | upstream | 2139349 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
trnaq-cug_16 | other | upstream | 3326820 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
trnal-aag_8 | other | upstream | 4548462 | 10064545 ~ 10064626 (+) | True | trnal-aag_8 |
TU234137 | other | downstream | 2241310 | 16855770 ~ 16863495 (+) | False | anapc16 |
trnai-uau_6 | other | downstream | 2962823 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
TU234778 | other | downstream | 3540691 | 18155151 ~ 18158629 (+) | False | pde6gb |
TU235296 | other | downstream | 3827426 | 18441886 ~ 18510159 (+) | True | G198737 |
XR_004579138.1 | other | downstream | 4191625 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |