Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU234570 |
| length | 647 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G198091 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 17575940 ~ 17576586 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU234559 | lncRNA | upstream | 1707 | 17572305 ~ 17574233 (+) | True | G198081 |
| TU234560 | lncRNA | upstream | 3935 | 17570664 ~ 17572005 (+) | False | mta3 |
| TU234562 | lncRNA | upstream | 6778 | 17568378 ~ 17569162 (+) | True | G198084 |
| TU234561 | lncRNA | upstream | 10909 | 17564599 ~ 17565031 (+) | True | G198083 |
| TU234556 | lncRNA | upstream | 33868 | 17541856 ~ 17542072 (+) | True | G198078 |
| TU234567 | lncRNA | downstream | 93594 | 17670180 ~ 17670945 (+) | True | G198088 |
| TU234642 | lncRNA | downstream | 286953 | 17863539 ~ 17912523 (+) | True | G198158 |
| TU234657 | lncRNA | downstream | 338840 | 17915426 ~ 17918595 (+) | True | G198170 |
| TU234661 | lncRNA | downstream | 357444 | 17934030 ~ 17934370 (+) | True | G198174 |
| TU234664 | lncRNA | downstream | 360946 | 17937532 ~ 17937771 (+) | True | G198177 |
| XM_026915018.2 | mRNA | upstream | 3875 | 17545793 ~ 17572065 (+) | True | mta3 |
| XM_026915019.2 | mRNA | upstream | 3875 | 17545793 ~ 17572065 (+) | False | mta3 |
| XM_026915020.2 | mRNA | upstream | 5024 | 17545793 ~ 17570916 (+) | False | mta3 |
| XM_026915218.2 | mRNA | upstream | 88214 | 17480223 ~ 17487726 (+) | True | pigf |
| XM_026915604.2 | mRNA | upstream | 102115 | 17468136 ~ 17473825 (+) | True | gch2 |
| XM_026914980.2 | mRNA | downstream | 66434 | 17643020 ~ 17669237 (+) | True | ppm1bb |
| XM_026914979.2 | mRNA | downstream | 66434 | 17643020 ~ 17665378 (+) | False | ppm1bb |
| XM_026915577.2 | mRNA | downstream | 132330 | 17708916 ~ 17711812 (+) | True | six3b |
| XM_026915176.2 | mRNA | downstream | 156174 | 17732760 ~ 17792629 (+) | True | prkcea |
| XM_026914794.2 | mRNA | downstream | 219442 | 17796028 ~ 17822290 (+) | True | epas1a |
| TU234137 | other | upstream | 712445 | 16855770 ~ 16863495 (+) | False | anapc16 |
| XR_004579176.1 | other | upstream | 4017427 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | upstream | 4017511 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU231182 | other | upstream | 5102201 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| trnaq-cug_16 | other | upstream | 6289672 | 11286197 ~ 11286268 (+) | True | trnaq-cug_16 |
| trnai-uau_6 | other | downstream | 697 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
| TU234778 | other | downstream | 578565 | 18155151 ~ 18158629 (+) | False | pde6gb |
| TU235296 | other | downstream | 865300 | 18441886 ~ 18510159 (+) | True | G198737 |
| XR_004579138.1 | other | downstream | 1229499 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |
| TU235479 | other | downstream | 1229537 | 18806123 ~ 18811512 (+) | False | si:ch211-221j21.3 |
