Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU234664 |
| length | 240 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G198177 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 17937532 ~ 17937771 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU234661 | lncRNA | upstream | 3162 | 17934030 ~ 17934370 (+) | True | G198174 |
| TU234657 | lncRNA | upstream | 18937 | 17915426 ~ 17918595 (+) | True | G198170 |
| TU234642 | lncRNA | upstream | 25009 | 17863539 ~ 17912523 (+) | True | G198158 |
| TU234567 | lncRNA | upstream | 266587 | 17670180 ~ 17670945 (+) | True | G198088 |
| TU234570 | lncRNA | upstream | 360946 | 17575940 ~ 17576586 (+) | True | G198091 |
| TU234706 | lncRNA | downstream | 47392 | 17985163 ~ 17985468 (+) | True | G198213 |
| TU234779 | lncRNA | downstream | 200380 | 18138151 ~ 18139043 (+) | True | G198279 |
| TU234782 | lncRNA | downstream | 223903 | 18161674 ~ 18177516 (+) | True | G198282 |
| XR_004579322.1 | lncRNA | downstream | 224947 | 18162718 ~ 18167376 (+) | True | LOC117598699 |
| TU234820 | lncRNA | downstream | 411193 | 18348964 ~ 18349413 (+) | True | G198311 |
| XM_026914800.2 | mRNA | upstream | 59250 | 17868862 ~ 17878282 (+) | True | mmrn2b |
| XM_026914801.2 | mRNA | upstream | 59250 | 17868862 ~ 17878282 (+) | False | mmrn2b |
| XM_034309213.1 | mRNA | upstream | 59250 | 17869171 ~ 17878282 (+) | False | mmrn2b |
| XM_026914964.2 | mRNA | upstream | 86674 | 17832805 ~ 17850858 (+) | True | glud1b |
| XM_026914794.2 | mRNA | upstream | 115242 | 17796028 ~ 17822290 (+) | True | epas1a |
| XM_026915649.2 | mRNA | downstream | 171868 | 18109639 ~ 18120051 (+) | True | gpr142 |
| XM_026915470.2 | mRNA | downstream | 185386 | 18123157 ~ 18126303 (+) | True | itln3 |
| XM_034309643.1 | mRNA | downstream | 190228 | 18127999 ~ 18136358 (+) | False | gprc5c |
| XM_026915815.2 | mRNA | downstream | 190231 | 18128002 ~ 18136358 (+) | True | gprc5c |
| XM_026914778.2 | mRNA | downstream | 212720 | 18150491 ~ 18153090 (+) | True | oxld1 |
| trnai-uau_6 | other | upstream | 360156 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
| TU234137 | other | upstream | 1074037 | 16855770 ~ 16863495 (+) | False | anapc16 |
| XR_004579176.1 | other | upstream | 4379019 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | upstream | 4379103 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| TU231182 | other | upstream | 5463793 | 12472683 ~ 12473739 (+) | False | LOC113527673 |
| TU234778 | other | downstream | 217380 | 18155151 ~ 18158629 (+) | False | pde6gb |
| TU235296 | other | downstream | 504115 | 18441886 ~ 18510159 (+) | True | G198737 |
| XR_004579138.1 | other | downstream | 868314 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |
| TU235479 | other | downstream | 868352 | 18806123 ~ 18811512 (+) | False | si:ch211-221j21.3 |
| XR_004579324.1 | other | downstream | 1588871 | 19526642 ~ 19566684 (+) | False | LOC113527713 |
