Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU235296 |
| length | 1122 |
| RNA type | TUCP |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G198737 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 18441886 ~ 18510159 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU235279 | lncRNA | upstream | 21902 | 18418083 ~ 18419984 (+) | True | G198722 |
| TU234820 | lncRNA | upstream | 92473 | 18348964 ~ 18349413 (+) | True | G198311 |
| TU234782 | lncRNA | upstream | 264370 | 18161674 ~ 18177516 (+) | True | G198282 |
| XR_004579322.1 | lncRNA | upstream | 274510 | 18162718 ~ 18167376 (+) | True | LOC117598699 |
| TU234779 | lncRNA | upstream | 302843 | 18138151 ~ 18139043 (+) | True | G198279 |
| TU235326 | lncRNA | downstream | 15509 | 18525668 ~ 18531296 (+) | True | G198767 |
| TU235395 | lncRNA | downstream | 170014 | 18680173 ~ 18698503 (+) | True | G198818 |
| TU235453 | lncRNA | downstream | 193316 | 18703475 ~ 18703699 (+) | True | G198876 |
| TU235464 | lncRNA | downstream | 258234 | 18768393 ~ 18768690 (+) | True | G198886 |
| TU235481 | lncRNA | downstream | 313474 | 18823633 ~ 18824561 (+) | True | G198901 |
| XM_026915375.2 | mRNA | upstream | 12198 | 18421553 ~ 18429688 (+) | True | LOC113527495 |
| XM_026914762.2 | mRNA | upstream | 93529 | 18300226 ~ 18348357 (+) | False | aatkb |
| XM_026914763.2 | mRNA | upstream | 93529 | 18303976 ~ 18348357 (+) | False | aatkb |
| XM_026914764.2 | mRNA | upstream | 93529 | 18325995 ~ 18348357 (+) | False | aatkb |
| XM_026914765.2 | mRNA | upstream | 93529 | 18331519 ~ 18348357 (+) | True | aatkb |
| XM_026915613.2 | mRNA | downstream | 104032 | 18614191 ~ 18702757 (+) | True | LOC113527622 |
| XM_026915614.2 | mRNA | downstream | 104032 | 18614191 ~ 18702757 (+) | False | LOC113527622 |
| XM_034309113.1 | mRNA | downstream | 295918 | 18806077 ~ 18812262 (+) | False | si:ch211-221j21.3 |
| XM_034309112.1 | mRNA | downstream | 295931 | 18806090 ~ 18812262 (+) | False | si:ch211-221j21.3 |
| XM_026915562.2 | mRNA | downstream | 317477 | 18827636 ~ 18920766 (+) | True | ebf3a |
| TU234778 | other | upstream | 283257 | 18155151 ~ 18158629 (+) | False | pde6gb |
| trnai-uau_6 | other | upstream | 864510 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
| TU234137 | other | upstream | 1578391 | 16855770 ~ 16863495 (+) | False | anapc16 |
| XR_004579176.1 | other | upstream | 4883373 | 13483301 ~ 13558513 (+) | False | tcf7l2 |
| XR_004579175.1 | other | upstream | 4883457 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| XR_004579138.1 | other | downstream | 295926 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |
| TU235479 | other | downstream | 295964 | 18806123 ~ 18811512 (+) | False | si:ch211-221j21.3 |
| XR_004579324.1 | other | downstream | 1016483 | 19526642 ~ 19566684 (+) | False | LOC113527713 |
| TU237322 | other | downstream | 3492665 | 22002824 ~ 22003274 (+) | True | G200571 |
| XR_003402874.2 | other | downstream | 3498352 | 22008511 ~ 22012304 (+) | False | srsf2a |
