Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034309113.1 |
| length | 1219 |
| RNA type | mRNA |
| GC content | 0.37 |
| exon number | 4 |
| gene id | si:ch211-221j21.3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 18806077 ~ 18812262 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU235464 | lncRNA | upstream | 37387 | 18768393 ~ 18768690 (+) | True | G198886 |
| TU235453 | lncRNA | upstream | 102378 | 18703475 ~ 18703699 (+) | True | G198876 |
| TU235395 | lncRNA | upstream | 107574 | 18680173 ~ 18698503 (+) | True | G198818 |
| TU235326 | lncRNA | upstream | 274781 | 18525668 ~ 18531296 (+) | True | G198767 |
| TU235279 | lncRNA | upstream | 386093 | 18418083 ~ 18419984 (+) | True | G198722 |
| TU235481 | lncRNA | downstream | 11371 | 18823633 ~ 18824561 (+) | True | G198901 |
| XR_003402870.2 | lncRNA | downstream | 497221 | 19309483 ~ 19314815 (+) | True | LOC113527366 |
| TU235663 | lncRNA | downstream | 614118 | 19426380 ~ 19426595 (+) | True | G199051 |
| TU235786 | lncRNA | downstream | 980372 | 19792634 ~ 19856480 (+) | True | G199161 |
| TU235814 | lncRNA | downstream | 1064479 | 19876741 ~ 19885988 (+) | True | G199187 |
| XM_026915613.2 | mRNA | upstream | 103320 | 18614191 ~ 18702757 (+) | True | LOC113527622 |
| XM_026915614.2 | mRNA | upstream | 103320 | 18614191 ~ 18702757 (+) | False | LOC113527622 |
| XM_026915376.2 | mRNA | upstream | 298219 | 18498245 ~ 18507858 (+) | True | bnip3 |
| XM_026915375.2 | mRNA | upstream | 376389 | 18421553 ~ 18429688 (+) | True | LOC113527495 |
| XM_026914764.2 | mRNA | upstream | 457720 | 18325995 ~ 18348357 (+) | False | aatkb |
| XM_026915562.2 | mRNA | downstream | 15374 | 18827636 ~ 18920766 (+) | True | ebf3a |
| XM_034309466.1 | mRNA | downstream | 15375 | 18827637 ~ 18920766 (+) | False | ebf3a |
| XM_026915574.2 | mRNA | downstream | 15377 | 18827639 ~ 18920766 (+) | False | ebf3a |
| XM_026915575.2 | mRNA | downstream | 15377 | 18827639 ~ 18920766 (+) | False | ebf3a |
| XM_026915570.2 | mRNA | downstream | 16159 | 18828421 ~ 18920766 (+) | False | ebf3a |
| TU235296 | other | upstream | 295918 | 18441886 ~ 18510159 (+) | True | G198737 |
| TU234778 | other | upstream | 647448 | 18155151 ~ 18158629 (+) | False | pde6gb |
| trnai-uau_6 | other | upstream | 1228701 | 17577283 ~ 17577376 (+) | True | trnai-uau_6 |
| TU234137 | other | upstream | 1942582 | 16855770 ~ 16863495 (+) | False | anapc16 |
| XR_004579175.1 | other | upstream | 5247648 | 13483301 ~ 13558429 (+) | False | tcf7l2 |
| XR_004579324.1 | other | downstream | 714380 | 19526642 ~ 19566684 (+) | False | LOC113527713 |
| TU237322 | other | downstream | 3190562 | 22002824 ~ 22003274 (+) | True | G200571 |
| XR_003402874.2 | other | downstream | 3196249 | 22008511 ~ 22012304 (+) | False | srsf2a |
| TU237829 | other | downstream | 3985919 | 22798181 ~ 22871284 (+) | True | mrpl27 |
| TU237980 | other | downstream | 4393404 | 23205666 ~ 23206379 (+) | True | G201154 |
