Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU237058 |
| length | 241 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G200325 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 21384076 ~ 21386033 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko05322 | Systemic lupus erythematosus |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU236496 | lncRNA | upstream | 788632 | 20595241 ~ 20595444 (+) | True | G199796 |
| XR_004579191.1 | lncRNA | upstream | 1132602 | 20234815 ~ 20251474 (+) | False | LOC113527335 |
| TU237068 | lncRNA | downstream | 71386 | 21457419 ~ 21457764 (+) | False | si:ch211-216b21.2 |
| TU237153 | lncRNA | downstream | 224221 | 21610254 ~ 21610457 (+) | True | G200418 |
| TU237157 | lncRNA | downstream | 253661 | 21639694 ~ 21643654 (+) | True | G200420 |
| TU237170 | lncRNA | downstream | 267198 | 21653231 ~ 21654736 (+) | True | G200430 |
| TU237306 | lncRNA | downstream | 588196 | 21974229 ~ 21978282 (+) | True | G200555 |
| XM_026915385.2 | mRNA | upstream | 231150 | 21139857 ~ 21152926 (+) | True | pmp22b |
| XM_026915607.2 | mRNA | upstream | 263123 | 21112476 ~ 21120953 (+) | True | tekt3 |
| XM_026914643.2 | mRNA | upstream | 314612 | 21062462 ~ 21069464 (+) | True | LOC113527122 |
| XM_026914644.2 | mRNA | upstream | 314612 | 21062462 ~ 21069464 (+) | False | LOC113527122 |
| XM_026915237.2 | mRNA | upstream | 375691 | 20979187 ~ 21008385 (+) | False | lzts2b |
| XM_026914739.2 | mRNA | downstream | 71358 | 21457391 ~ 21500929 (+) | True | si:ch211-216b21.2 |
| XM_026915925.2 | mRNA | downstream | 226925 | 21612958 ~ 21639584 (+) | True | unc13d |
| XM_026915418.2 | mRNA | downstream | 367308 | 21753341 ~ 21777831 (+) | True | kcnj16 |
| XM_026915419.2 | mRNA | downstream | 367433 | 21753466 ~ 21777831 (+) | False | kcnj16 |
| XM_026915823.2 | mRNA | downstream | 396996 | 21783029 ~ 21790227 (+) | True | kcnj2a |
| XR_004579324.1 | other | upstream | 1817392 | 19526642 ~ 19566684 (+) | False | LOC113527713 |
| XR_004579138.1 | other | upstream | 2571814 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |
| TU235479 | other | upstream | 2572564 | 18806123 ~ 18811512 (+) | False | si:ch211-221j21.3 |
| TU235296 | other | upstream | 2873917 | 18441886 ~ 18510159 (+) | True | G198737 |
| TU234778 | other | upstream | 3225447 | 18155151 ~ 18158629 (+) | False | pde6gb |
| TU237322 | other | downstream | 616791 | 22002824 ~ 22003274 (+) | True | G200571 |
| XR_003402874.2 | other | downstream | 622478 | 22008511 ~ 22012304 (+) | False | srsf2a |
| TU237829 | other | downstream | 1412148 | 22798181 ~ 22871284 (+) | True | mrpl27 |
| TU237980 | other | downstream | 1819633 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU238054 | other | downstream | 1938040 | 23324073 ~ 23329571 (+) | True | G201214 |
