Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU237068 |
| length | 346 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 1 |
| gene id | si:ch211-216b21.2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 21457391 ~ 21500929 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU237058 | lncRNA | upstream | 71386 | 21384076 ~ 21386033 (+) | True | G200325 |
| TU236496 | lncRNA | upstream | 861975 | 20595241 ~ 20595444 (+) | True | G199796 |
| XR_003402864.2 | lncRNA | upstream | 1205945 | 20234816 ~ 20251474 (+) | True | LOC113527335 |
| TU237153 | lncRNA | downstream | 152490 | 21610254 ~ 21610457 (+) | True | G200418 |
| TU237157 | lncRNA | downstream | 181930 | 21639694 ~ 21643654 (+) | True | G200420 |
| TU237170 | lncRNA | downstream | 195467 | 21653231 ~ 21654736 (+) | True | G200430 |
| TU237306 | lncRNA | downstream | 516465 | 21974229 ~ 21978282 (+) | True | G200555 |
| TU237307 | lncRNA | downstream | 521319 | 21979083 ~ 21979381 (+) | True | G200556 |
| XM_026915385.2 | mRNA | upstream | 304493 | 21139857 ~ 21152926 (+) | True | pmp22b |
| XM_026915607.2 | mRNA | upstream | 336466 | 21112476 ~ 21120953 (+) | True | tekt3 |
| XM_026914643.2 | mRNA | upstream | 387955 | 21062462 ~ 21069464 (+) | True | LOC113527122 |
| XM_026914644.2 | mRNA | upstream | 387955 | 21062462 ~ 21069464 (+) | False | LOC113527122 |
| XM_026915238.2 | mRNA | upstream | 449034 | 20992363 ~ 21008385 (+) | True | lzts2b |
| XM_026915925.2 | mRNA | downstream | 155194 | 21612958 ~ 21639584 (+) | True | unc13d |
| XM_026915418.2 | mRNA | downstream | 295577 | 21753341 ~ 21777831 (+) | True | kcnj16 |
| XM_026915419.2 | mRNA | downstream | 295702 | 21753466 ~ 21777831 (+) | False | kcnj16 |
| XM_026915823.2 | mRNA | downstream | 325265 | 21783029 ~ 21790227 (+) | True | kcnj2a |
| XM_026914870.2 | mRNA | downstream | 478651 | 21936415 ~ 21959218 (+) | True | itgb3b |
| XR_004579324.1 | other | upstream | 1890735 | 19526642 ~ 19566684 (+) | False | LOC113527713 |
| XR_004579138.1 | other | upstream | 2645157 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |
| TU235479 | other | upstream | 2645907 | 18806123 ~ 18811512 (+) | False | si:ch211-221j21.3 |
| TU235296 | other | upstream | 2947260 | 18441886 ~ 18510159 (+) | True | G198737 |
| TU234778 | other | upstream | 3298790 | 18155151 ~ 18158629 (+) | False | pde6gb |
| TU237322 | other | downstream | 545060 | 22002824 ~ 22003274 (+) | True | G200571 |
| XR_003402874.2 | other | downstream | 550747 | 22008511 ~ 22012304 (+) | False | srsf2a |
| TU237829 | other | downstream | 1340417 | 22798181 ~ 22871284 (+) | True | mrpl27 |
| TU237980 | other | downstream | 1747902 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU238054 | other | downstream | 1866309 | 23324073 ~ 23329571 (+) | True | G201214 |
