Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU237311 |
| length | 350 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G200560 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 21987520 ~ 21987869 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU237310 | lncRNA | upstream | 519 | 21986362 ~ 21987001 (+) | True | G200559 |
| TU237307 | lncRNA | upstream | 8139 | 21979083 ~ 21979381 (+) | True | G200556 |
| TU237306 | lncRNA | upstream | 9238 | 21974229 ~ 21978282 (+) | True | G200555 |
| TU237170 | lncRNA | upstream | 332784 | 21653231 ~ 21654736 (+) | True | G200430 |
| TU237157 | lncRNA | upstream | 343866 | 21639694 ~ 21643654 (+) | True | G200420 |
| TU237312 | lncRNA | downstream | 317 | 21988186 ~ 21988754 (+) | True | G200561 |
| TU237320 | lncRNA | downstream | 11817 | 21999686 ~ 21999892 (+) | True | G200569 |
| TU237327 | lncRNA | downstream | 25937 | 22013806 ~ 22026481 (+) | True | LOC113527202 |
| TU237575 | lncRNA | downstream | 126537 | 22114406 ~ 22114822 (+) | True | G200779 |
| TU237582 | lncRNA | downstream | 136364 | 22124233 ~ 22242312 (+) | True | G200784 |
| XM_026914657.2 | mRNA | upstream | 20773 | 21961174 ~ 21966747 (+) | True | nat9 |
| XM_026914659.2 | mRNA | upstream | 21243 | 21961118 ~ 21966277 (+) | False | nat9 |
| XM_026914660.2 | mRNA | upstream | 21243 | 21961171 ~ 21966277 (+) | False | nat9 |
| XM_026914870.2 | mRNA | upstream | 28302 | 21936415 ~ 21959218 (+) | True | itgb3b |
| XM_026915823.2 | mRNA | upstream | 197293 | 21783029 ~ 21790227 (+) | True | kcnj2a |
| XM_026915256.2 | mRNA | downstream | 20642 | 22008511 ~ 22012304 (+) | True | srsf2a |
| XM_026915255.2 | mRNA | downstream | 20642 | 22008511 ~ 22011852 (+) | False | srsf2a |
| XM_034309366.1 | mRNA | downstream | 26207 | 22014076 ~ 22025694 (+) | False | LOC113527202 |
| XM_026914805.2 | mRNA | downstream | 41220 | 22029089 ~ 22035625 (+) | True | LOC113527221 |
| XM_034309324.1 | mRNA | downstream | 50103 | 22037972 ~ 22089270 (+) | True | si:ch211-119c20.2 |
| XR_004579324.1 | other | upstream | 2420836 | 19526642 ~ 19566684 (+) | False | LOC113527713 |
| XR_004579138.1 | other | upstream | 3175258 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |
| TU235479 | other | upstream | 3176008 | 18806123 ~ 18811512 (+) | False | si:ch211-221j21.3 |
| TU235296 | other | upstream | 3477361 | 18441886 ~ 18510159 (+) | True | G198737 |
| TU234778 | other | upstream | 3828891 | 18155151 ~ 18158629 (+) | False | pde6gb |
| TU237322 | other | downstream | 14955 | 22002824 ~ 22003274 (+) | True | G200571 |
| XR_003402874.2 | other | downstream | 20642 | 22008511 ~ 22012304 (+) | False | srsf2a |
| TU237829 | other | downstream | 810312 | 22798181 ~ 22871284 (+) | True | mrpl27 |
| TU237980 | other | downstream | 1217797 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU238054 | other | downstream | 1336204 | 23324073 ~ 23329571 (+) | True | G201214 |
