Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026915534.2 |
| length | 654 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 4 |
| gene id | mrpl27 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 22798142 ~ 22871284 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU237612 | lncRNA | upstream | 450024 | 22347890 ~ 22348118 (+) | True | G200807 |
| TU237582 | lncRNA | upstream | 555830 | 22124233 ~ 22242312 (+) | True | G200784 |
| TU237575 | lncRNA | upstream | 683320 | 22114406 ~ 22114822 (+) | True | G200779 |
| TU237327 | lncRNA | upstream | 771661 | 22013806 ~ 22026481 (+) | True | LOC113527202 |
| TU237320 | lncRNA | upstream | 798250 | 21999686 ~ 21999892 (+) | True | G200569 |
| TU237831 | lncRNA | downstream | 64270 | 22866908 ~ 22868838 (+) | True | G201019 |
| TU237911 | lncRNA | downstream | 300646 | 23103284 ~ 23103499 (+) | True | G201093 |
| TU237895 | lncRNA | downstream | 302038 | 23104676 ~ 23105908 (+) | True | G201077 |
| TU238015 | lncRNA | downstream | 465989 | 23268627 ~ 23269419 (+) | True | G201186 |
| TU238014 | lncRNA | downstream | 466154 | 23268792 ~ 23269419 (+) | False | G201186 |
| XM_026914735.2 | mRNA | upstream | 96306 | 22508418 ~ 22701836 (+) | True | ca10a |
| XM_034309600.1 | mRNA | upstream | 555367 | 22240505 ~ 22242775 (+) | True | LOC117598678 |
| XM_026915642.2 | mRNA | upstream | 594113 | 22201501 ~ 22204029 (+) | True | LOC113527641 |
| XM_026915616.2 | mRNA | upstream | 671496 | 22124336 ~ 22126646 (+) | True | LOC113527624 |
| XM_026914931.2 | mRNA | upstream | 708872 | 22038142 ~ 22089270 (+) | False | si:ch211-119c20.2 |
| XM_034309559.1 | mRNA | downstream | 4541 | 22807179 ~ 22847566 (+) | True | pkd1b |
| XM_034309560.1 | mRNA | downstream | 4541 | 22807179 ~ 22847566 (+) | False | pkd1b |
| XM_034309561.1 | mRNA | downstream | 4541 | 22807179 ~ 22847566 (+) | False | pkd1b |
| XM_026915333.2 | mRNA | downstream | 4541 | 22807179 ~ 22847565 (+) | False | pkd1b |
| XM_034309563.1 | mRNA | downstream | 4541 | 22807179 ~ 22847563 (+) | False | pkd1b |
| XR_003402874.2 | other | upstream | 785838 | 22008511 ~ 22012304 (+) | False | srsf2a |
| TU237322 | other | upstream | 794868 | 22002824 ~ 22003274 (+) | True | G200571 |
| XR_004579324.1 | other | upstream | 3231458 | 19526642 ~ 19566684 (+) | False | LOC113527713 |
| XR_004579138.1 | other | upstream | 3985880 | 18806085 ~ 18812262 (+) | True | si:ch211-221j21.3 |
| TU237980 | other | downstream | 403028 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU238054 | other | downstream | 521435 | 23324073 ~ 23329571 (+) | True | G201214 |
| TU238026 | other | downstream | 554873 | 23357511 ~ 23398660 (+) | False | polr2a |
| TU238950 | other | downstream | 1579149 | 24381787 ~ 24382287 (+) | True | G201962 |
| TU239119 | other | downstream | 1858587 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
