Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU238015 |
| length | 793 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G201186 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 23268627 ~ 23269419 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU237895 | lncRNA | upstream | 162719 | 23104676 ~ 23105908 (+) | True | G201077 |
| TU237911 | lncRNA | upstream | 165128 | 23103284 ~ 23103499 (+) | True | G201093 |
| TU237831 | lncRNA | upstream | 399789 | 22866908 ~ 22868838 (+) | True | G201019 |
| TU237612 | lncRNA | upstream | 920509 | 22347890 ~ 22348118 (+) | True | G200807 |
| TU237582 | lncRNA | upstream | 1026315 | 22124233 ~ 22242312 (+) | True | G200784 |
| TU238025 | lncRNA | downstream | 3155 | 23272574 ~ 23398660 (+) | False | polr2a |
| TU238060 | lncRNA | downstream | 42659 | 23312078 ~ 23313405 (+) | False | LOC117595720 |
| TU238079 | lncRNA | downstream | 105655 | 23375074 ~ 23380990 (+) | True | G201234 |
| TU238092 | lncRNA | downstream | 190583 | 23460002 ~ 23460455 (+) | True | G201240 |
| TU238120 | lncRNA | downstream | 372987 | 23642406 ~ 23688417 (+) | False | afap1 |
| XM_026914971.2 | mRNA | upstream | 3227 | 23239297 ~ 23265400 (+) | True | hdlbpb |
| XM_026915466.2 | mRNA | upstream | 101140 | 23132483 ~ 23167487 (+) | True | wnt3 |
| XM_034309362.1 | mRNA | upstream | 101140 | 23132524 ~ 23167487 (+) | False | wnt3 |
| XM_034309363.1 | mRNA | upstream | 101140 | 23132529 ~ 23167487 (+) | False | wnt3 |
| XM_026915340.2 | mRNA | upstream | 415131 | 22849303 ~ 22853496 (+) | True | LOC113527478 |
| XM_034309602.1 | mRNA | downstream | 41841 | 23311260 ~ 23318154 (+) | True | LOC117595720 |
| XM_034309049.1 | mRNA | downstream | 46174 | 23315593 ~ 23321228 (+) | True | LOC113527736 |
| XM_026915816.2 | mRNA | downstream | 46177 | 23315596 ~ 23321228 (+) | False | LOC113527736 |
| XM_034309273.1 | mRNA | downstream | 112325 | 23381744 ~ 23398663 (+) | True | polr2a |
| XM_026914512.2 | mRNA | downstream | 132764 | 23402183 ~ 23420064 (+) | True | capgb |
| TU237980 | other | upstream | 62248 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU237829 | other | upstream | 397343 | 22798181 ~ 22871284 (+) | True | mrpl27 |
| XR_003402874.2 | other | upstream | 1256323 | 22008511 ~ 22012304 (+) | False | srsf2a |
| TU237322 | other | upstream | 1265353 | 22002824 ~ 22003274 (+) | True | G200571 |
| XR_004579324.1 | other | upstream | 3701943 | 19526642 ~ 19566684 (+) | False | LOC113527713 |
| TU238054 | other | downstream | 54654 | 23324073 ~ 23329571 (+) | True | G201214 |
| TU238026 | other | downstream | 88092 | 23357511 ~ 23398660 (+) | False | polr2a |
| TU238950 | other | downstream | 1112368 | 24381787 ~ 24382287 (+) | True | G201962 |
| TU239119 | other | downstream | 1391806 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
| TU239415 | other | downstream | 2059790 | 25329209 ~ 25354290 (+) | False | dupd1 |
