Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU238025 |
| length | 236 |
| lncRNA type | read_through |
| GC content | 0.37 |
| exon number | 3 |
| gene id | polr2a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 23272574 ~ 23398663 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU238015 | lncRNA | upstream | 3155 | 23268627 ~ 23269419 (+) | True | G201186 |
| TU238014 | lncRNA | upstream | 3155 | 23268792 ~ 23269419 (+) | False | G201186 |
| TU237895 | lncRNA | upstream | 166666 | 23104676 ~ 23105908 (+) | True | G201077 |
| TU237911 | lncRNA | upstream | 169075 | 23103284 ~ 23103499 (+) | True | G201093 |
| TU237831 | lncRNA | upstream | 403736 | 22866908 ~ 22868838 (+) | True | G201019 |
| TU238092 | lncRNA | downstream | 61342 | 23460002 ~ 23460455 (+) | True | G201240 |
| TU238120 | lncRNA | downstream | 243746 | 23642406 ~ 23688417 (+) | False | afap1 |
| TU238141 | lncRNA | downstream | 302059 | 23700719 ~ 23729010 (+) | True | G201281 |
| TU238144 | lncRNA | downstream | 320387 | 23719047 ~ 23722939 (+) | True | G201284 |
| TU238157 | lncRNA | downstream | 339697 | 23738357 ~ 23740340 (+) | True | G201297 |
| XM_026914971.2 | mRNA | upstream | 7174 | 23239297 ~ 23265400 (+) | True | hdlbpb |
| XM_026915466.2 | mRNA | upstream | 105087 | 23132483 ~ 23167487 (+) | True | wnt3 |
| XM_034309362.1 | mRNA | upstream | 105087 | 23132524 ~ 23167487 (+) | False | wnt3 |
| XM_034309363.1 | mRNA | upstream | 105087 | 23132529 ~ 23167487 (+) | False | wnt3 |
| XM_026915340.2 | mRNA | upstream | 419078 | 22849303 ~ 22853496 (+) | True | LOC113527478 |
| XM_026914512.2 | mRNA | downstream | 3523 | 23402183 ~ 23420064 (+) | True | capgb |
| XM_026914799.2 | mRNA | downstream | 28215 | 23426875 ~ 23436725 (+) | False | si:dkey-219e21.2 |
| XM_026914798.2 | mRNA | downstream | 28215 | 23426875 ~ 23436724 (+) | True | si:dkey-219e21.2 |
| XM_026915767.2 | mRNA | downstream | 48483 | 23447143 ~ 23459505 (+) | True | mfsd8 |
| XM_034309526.1 | mRNA | downstream | 67697 | 23466357 ~ 23472229 (+) | True | si:dkey-219e21.4 |
| TU237980 | other | upstream | 66195 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU237829 | other | upstream | 401290 | 22798181 ~ 22871284 (+) | True | mrpl27 |
| XR_003402874.2 | other | upstream | 1260270 | 22008511 ~ 22012304 (+) | False | srsf2a |
| TU237322 | other | upstream | 1269300 | 22002824 ~ 22003274 (+) | True | G200571 |
| XR_004579324.1 | other | upstream | 3705890 | 19526642 ~ 19566684 (+) | False | LOC113527713 |
| TU238950 | other | downstream | 983127 | 24381787 ~ 24382287 (+) | True | G201962 |
| TU239119 | other | downstream | 1262565 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
| TU239415 | other | downstream | 1930549 | 25329209 ~ 25354290 (+) | False | dupd1 |
| TU239521 | other | downstream | 2099055 | 25497715 ~ 25498919 (+) | True | G202397 |
| TU239496 | other | downstream | 2099520 | 25498180 ~ 25502628 (+) | True | G202374 |
