Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU238092 |
| length | 454 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G201240 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 23460002 ~ 23460455 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU238025 | lncRNA | upstream | 61342 | 23272574 ~ 23398660 (+) | False | polr2a |
| TU238079 | lncRNA | upstream | 79012 | 23375074 ~ 23380990 (+) | True | G201234 |
| TU238060 | lncRNA | upstream | 146597 | 23312078 ~ 23313405 (+) | False | LOC117595720 |
| TU238015 | lncRNA | upstream | 190583 | 23268627 ~ 23269419 (+) | True | G201186 |
| TU238014 | lncRNA | upstream | 190583 | 23268792 ~ 23269419 (+) | False | G201186 |
| TU238120 | lncRNA | downstream | 181951 | 23642406 ~ 23688417 (+) | False | afap1 |
| TU238141 | lncRNA | downstream | 240264 | 23700719 ~ 23729010 (+) | True | G201281 |
| TU238144 | lncRNA | downstream | 258592 | 23719047 ~ 23722939 (+) | True | G201284 |
| TU238157 | lncRNA | downstream | 277902 | 23738357 ~ 23740340 (+) | True | G201297 |
| TU238518 | lncRNA | downstream | 302610 | 23763065 ~ 23763266 (+) | True | G201600 |
| XM_026915767.2 | mRNA | upstream | 497 | 23447143 ~ 23459505 (+) | True | mfsd8 |
| XM_026914799.2 | mRNA | upstream | 23277 | 23426875 ~ 23436725 (+) | False | si:dkey-219e21.2 |
| XM_026914798.2 | mRNA | upstream | 23278 | 23426875 ~ 23436724 (+) | True | si:dkey-219e21.2 |
| XM_026914512.2 | mRNA | upstream | 39938 | 23402183 ~ 23420064 (+) | True | capgb |
| XM_034309273.1 | mRNA | upstream | 61339 | 23381744 ~ 23398663 (+) | True | polr2a |
| XM_034309526.1 | mRNA | downstream | 5902 | 23466357 ~ 23472229 (+) | True | si:dkey-219e21.4 |
| XM_034309028.1 | mRNA | downstream | 80569 | 23541024 ~ 23600132 (+) | True | ablim2 |
| XM_034309029.1 | mRNA | downstream | 80569 | 23541024 ~ 23600132 (+) | False | ablim2 |
| XM_034309031.1 | mRNA | downstream | 80570 | 23541025 ~ 23600131 (+) | False | ablim2 |
| XM_034309032.1 | mRNA | downstream | 80570 | 23541025 ~ 23600131 (+) | False | ablim2 |
| TU238026 | other | upstream | 61342 | 23357511 ~ 23398660 (+) | False | polr2a |
| TU238054 | other | upstream | 130431 | 23324073 ~ 23329571 (+) | True | G201214 |
| TU237980 | other | upstream | 253623 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU237829 | other | upstream | 588718 | 22798181 ~ 22871284 (+) | True | mrpl27 |
| XR_003402874.2 | other | upstream | 1447698 | 22008511 ~ 22012304 (+) | False | srsf2a |
| TU238950 | other | downstream | 921332 | 24381787 ~ 24382287 (+) | True | G201962 |
| TU239119 | other | downstream | 1200770 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
| TU239415 | other | downstream | 1868754 | 25329209 ~ 25354290 (+) | False | dupd1 |
| TU239521 | other | downstream | 2037260 | 25497715 ~ 25498919 (+) | True | G202397 |
| TU239496 | other | downstream | 2037725 | 25498180 ~ 25502628 (+) | True | G202374 |
