Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU238732 |
| length | 1026 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G201782 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 24203862 ~ 24236779 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU238779 | lncRNA | upstream | 9877 | 24224878 ~ 24225626 (+) | True | G201814 |
| TU238756 | lncRNA | upstream | 78538 | 24156506 ~ 24156965 (+) | True | G201793 |
| TU238693 | lncRNA | upstream | 192260 | 24038938 ~ 24043243 (+) | True | G201753 |
| TU238523 | lncRNA | upstream | 374527 | 23775381 ~ 23860976 (+) | True | G201604 |
| TU238518 | lncRNA | upstream | 472237 | 23763065 ~ 23763266 (+) | True | G201600 |
| TU238812 | lncRNA | downstream | 100474 | 24337024 ~ 24338068 (+) | True | G201843 |
| TU238813 | lncRNA | downstream | 101584 | 24338134 ~ 24338730 (+) | True | G201844 |
| TU239003 | lncRNA | downstream | 243707 | 24480257 ~ 24482442 (+) | True | G202007 |
| TU238986 | lncRNA | downstream | 268762 | 24505312 ~ 24506076 (+) | False | LOC113527444 |
| TU239131 | lncRNA | downstream | 439132 | 24675682 ~ 24676158 (+) | True | G202115 |
| XM_034309376.1 | mRNA | upstream | 419 | 24132906 ~ 24235084 (+) | False | ctbp2l |
| XM_034309377.1 | mRNA | upstream | 419 | 24132906 ~ 24235084 (+) | False | ctbp2l |
| XM_034309375.1 | mRNA | upstream | 419 | 24132906 ~ 24235084 (+) | False | ctbp2l |
| XM_034309378.1 | mRNA | upstream | 419 | 24132906 ~ 24235084 (+) | False | ctbp2l |
| XM_034309373.1 | mRNA | upstream | 419 | 24206733 ~ 24235084 (+) | True | ctbp2l |
| XM_026914779.2 | mRNA | downstream | 30728 | 24267278 ~ 24273823 (+) | True | hpdl |
| XM_026915619.2 | mRNA | downstream | 48531 | 24285081 ~ 24323614 (+) | True | fam53b |
| XM_026915299.2 | mRNA | downstream | 143751 | 24380301 ~ 24398447 (+) | True | oat |
| XM_026915268.2 | mRNA | downstream | 219109 | 24455659 ~ 24505970 (+) | False | LOC113527444 |
| XM_026915269.2 | mRNA | downstream | 219109 | 24455659 ~ 24505970 (+) | False | LOC113527444 |
| TU238026 | other | upstream | 836843 | 23357511 ~ 23398660 (+) | False | polr2a |
| TU238054 | other | upstream | 905932 | 23324073 ~ 23329571 (+) | True | G201214 |
| TU237980 | other | upstream | 1029124 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU237829 | other | upstream | 1364219 | 22798181 ~ 22871284 (+) | True | mrpl27 |
| XR_003402874.2 | other | upstream | 2223199 | 22008511 ~ 22012304 (+) | False | srsf2a |
| TU238950 | other | downstream | 145237 | 24381787 ~ 24382287 (+) | True | G201962 |
| TU239119 | other | downstream | 424675 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
| TU239415 | other | downstream | 1092659 | 25329209 ~ 25354290 (+) | False | dupd1 |
| TU239521 | other | downstream | 1261165 | 25497715 ~ 25498919 (+) | True | G202397 |
| TU239496 | other | downstream | 1261630 | 25498180 ~ 25502628 (+) | True | G202374 |
