Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU238756 |
| length | 254 |
| lncRNA type | intronic |
| GC content | 0.54 |
| exon number | 2 |
| gene id | G201793 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 24156506 ~ 24156965 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU238693 | lncRNA | upstream | 113263 | 24038938 ~ 24043243 (+) | True | G201753 |
| TU238523 | lncRNA | upstream | 295530 | 23775381 ~ 23860976 (+) | True | G201604 |
| TU238518 | lncRNA | upstream | 393240 | 23763065 ~ 23763266 (+) | True | G201600 |
| TU238157 | lncRNA | upstream | 416166 | 23738357 ~ 23740340 (+) | True | G201297 |
| TU238141 | lncRNA | upstream | 427496 | 23700719 ~ 23729010 (+) | True | G201281 |
| TU238739 | lncRNA | downstream | 46897 | 24203862 ~ 24236550 (+) | False | G201782 |
| TU238779 | lncRNA | downstream | 67913 | 24224878 ~ 24225626 (+) | True | G201814 |
| TU238732 | lncRNA | downstream | 78538 | 24235503 ~ 24236550 (+) | False | G201782 |
| TU238736 | lncRNA | downstream | 78538 | 24235503 ~ 24236779 (+) | True | G201782 |
| TU238812 | lncRNA | downstream | 180059 | 24337024 ~ 24338068 (+) | True | G201843 |
| XM_026914558.2 | mRNA | upstream | 75894 | 24067539 ~ 24080612 (+) | True | mmp21 |
| XM_034309133.1 | mRNA | upstream | 91522 | 24047563 ~ 24064984 (+) | False | uros |
| XM_034309132.1 | mRNA | upstream | 91522 | 24050994 ~ 24064984 (+) | False | uros |
| XM_034309130.1 | mRNA | upstream | 91522 | 24050995 ~ 24064984 (+) | True | uros |
| XM_034309131.1 | mRNA | upstream | 91522 | 24051260 ~ 24064984 (+) | False | uros |
| XM_034309373.1 | mRNA | downstream | 49768 | 24206733 ~ 24235084 (+) | True | ctbp2l |
| XM_034309374.1 | mRNA | downstream | 49768 | 24206733 ~ 24235084 (+) | False | ctbp2l |
| XM_034309379.1 | mRNA | downstream | 54532 | 24211497 ~ 24235084 (+) | False | ctbp2l |
| XM_026914779.2 | mRNA | downstream | 110313 | 24267278 ~ 24273823 (+) | True | hpdl |
| XM_026915619.2 | mRNA | downstream | 128116 | 24285081 ~ 24323614 (+) | True | fam53b |
| TU238026 | other | upstream | 757846 | 23357511 ~ 23398660 (+) | False | polr2a |
| TU238054 | other | upstream | 826935 | 23324073 ~ 23329571 (+) | True | G201214 |
| TU237980 | other | upstream | 950127 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU237829 | other | upstream | 1285222 | 22798181 ~ 22871284 (+) | True | mrpl27 |
| XR_003402874.2 | other | upstream | 2144202 | 22008511 ~ 22012304 (+) | False | srsf2a |
| TU238950 | other | downstream | 224822 | 24381787 ~ 24382287 (+) | True | G201962 |
| TU239119 | other | downstream | 504260 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
| TU239415 | other | downstream | 1172244 | 25329209 ~ 25354290 (+) | False | dupd1 |
| TU239521 | other | downstream | 1340750 | 25497715 ~ 25498919 (+) | True | G202397 |
| TU239496 | other | downstream | 1341215 | 25498180 ~ 25502628 (+) | True | G202374 |
