Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU239219 |
| length | 594 |
| lncRNA type | inter_gene |
| GC content | 0.30 |
| exon number | 1 |
| gene id | G202182 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 24936284 ~ 24936877 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579132.1 | lncRNA | upstream | 42230 | 24872954 ~ 24894054 (+) | True | LOC117598464 |
| TU239202 | lncRNA | upstream | 44992 | 24845833 ~ 24891292 (+) | True | G202172 |
| TU239203 | lncRNA | upstream | 82399 | 24852287 ~ 24853885 (+) | True | G202173 |
| XR_004579278.1 | lncRNA | upstream | 117932 | 24816481 ~ 24818352 (+) | True | LOC117598647 |
| TU239191 | lncRNA | upstream | 117978 | 24816541 ~ 24818306 (+) | False | LOC117598647 |
| TU239263 | lncRNA | downstream | 34743 | 24971620 ~ 24973240 (+) | True | G202215 |
| TU239266 | lncRNA | downstream | 37027 | 24973904 ~ 25062169 (+) | True | G202218 |
| TU239334 | lncRNA | downstream | 150038 | 25086915 ~ 25088713 (+) | True | G202273 |
| TU239347 | lncRNA | downstream | 173411 | 25110288 ~ 25111484 (+) | True | G202286 |
| XR_004579129.1 | lncRNA | downstream | 197574 | 25134451 ~ 25135165 (+) | True | LOC113527241 |
| XM_026915509.2 | mRNA | upstream | 71603 | 24861416 ~ 24864681 (+) | True | LOC113527566 |
| XM_034309056.1 | mRNA | upstream | 251130 | 24677184 ~ 24685154 (+) | True | bub3 |
| XM_026915787.2 | mRNA | upstream | 253509 | 24677184 ~ 24682775 (+) | False | bub3 |
| XM_026915788.2 | mRNA | upstream | 261708 | 24669218 ~ 24674576 (+) | True | LOC113527709 |
| XM_026915789.2 | mRNA | upstream | 269676 | 24661044 ~ 24666608 (+) | True | LOC113527710 |
| XM_026914853.2 | mRNA | downstream | 62073 | 24998950 ~ 25003270 (+) | True | lrit1b |
| XM_026915511.2 | mRNA | downstream | 70971 | 25007848 ~ 25013291 (+) | True | lrit2 |
| XM_026915692.2 | mRNA | downstream | 126723 | 25063600 ~ 25079829 (+) | True | LOC113527669 |
| XM_034309493.1 | mRNA | downstream | 131679 | 25068556 ~ 25079829 (+) | False | LOC113527669 |
| XM_034309604.1 | mRNA | downstream | 209792 | 25146669 ~ 25153897 (+) | True | LOC117598682 |
| TU239119 | other | upstream | 270759 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
| TU238950 | other | upstream | 553997 | 24381787 ~ 24382287 (+) | True | G201962 |
| TU238026 | other | upstream | 1537624 | 23357511 ~ 23398660 (+) | False | polr2a |
| TU238054 | other | upstream | 1606713 | 23324073 ~ 23329571 (+) | True | G201214 |
| TU237980 | other | upstream | 1729905 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU239415 | other | downstream | 392332 | 25329209 ~ 25354290 (+) | False | dupd1 |
| TU239521 | other | downstream | 560838 | 25497715 ~ 25498919 (+) | True | G202397 |
| TU239496 | other | downstream | 561303 | 25498180 ~ 25502628 (+) | True | G202374 |
