Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU239334 |
| length | 535 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G202273 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 25086915 ~ 25088713 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU239266 | lncRNA | upstream | 24746 | 24973904 ~ 25062169 (+) | True | G202218 |
| TU239263 | lncRNA | upstream | 113675 | 24971620 ~ 24973240 (+) | True | G202215 |
| TU239219 | lncRNA | upstream | 150038 | 24936284 ~ 24936877 (+) | True | G202182 |
| XR_004579132.1 | lncRNA | upstream | 192861 | 24872954 ~ 24894054 (+) | True | LOC117598464 |
| TU239202 | lncRNA | upstream | 195623 | 24845833 ~ 24891292 (+) | True | G202172 |
| TU239347 | lncRNA | downstream | 21575 | 25110288 ~ 25111484 (+) | True | G202286 |
| XR_004579129.1 | lncRNA | downstream | 45738 | 25134451 ~ 25135165 (+) | True | LOC113527241 |
| TU239355 | lncRNA | downstream | 98069 | 25186782 ~ 25189327 (+) | False | G202290 |
| TU239356 | lncRNA | downstream | 98069 | 25186782 ~ 25189327 (+) | True | G202290 |
| TU239382 | lncRNA | downstream | 110997 | 25199710 ~ 25199947 (+) | True | G202310 |
| XM_026915692.2 | mRNA | upstream | 7086 | 25063600 ~ 25079829 (+) | True | LOC113527669 |
| XM_034309493.1 | mRNA | upstream | 7086 | 25068556 ~ 25079829 (+) | False | LOC113527669 |
| XM_026915511.2 | mRNA | upstream | 73624 | 25007848 ~ 25013291 (+) | True | lrit2 |
| XM_026914853.2 | mRNA | upstream | 83645 | 24998950 ~ 25003270 (+) | True | lrit1b |
| XM_026915509.2 | mRNA | upstream | 222234 | 24861416 ~ 24864681 (+) | True | LOC113527566 |
| XM_034309604.1 | mRNA | downstream | 57956 | 25146669 ~ 25153897 (+) | True | LOC117598682 |
| XM_034309567.1 | mRNA | downstream | 66279 | 25154992 ~ 25162871 (+) | True | LOC113527238 |
| XM_034309510.1 | mRNA | downstream | 172027 | 25260740 ~ 25270653 (+) | True | LOC113527655 |
| XM_026915668.2 | mRNA | downstream | 172027 | 25260740 ~ 25270653 (+) | False | LOC113527655 |
| XM_034309367.1 | mRNA | downstream | 294152 | 25382865 ~ 25386388 (+) | True | LOC117598570 |
| TU239119 | other | upstream | 421390 | 24661225 ~ 24665525 (+) | False | LOC113527710 |
| TU238950 | other | upstream | 704628 | 24381787 ~ 24382287 (+) | True | G201962 |
| TU238026 | other | upstream | 1688255 | 23357511 ~ 23398660 (+) | False | polr2a |
| TU238054 | other | upstream | 1757344 | 23324073 ~ 23329571 (+) | True | G201214 |
| TU237980 | other | upstream | 1880536 | 23205666 ~ 23206379 (+) | True | G201154 |
| TU239415 | other | downstream | 240496 | 25329209 ~ 25354290 (+) | False | dupd1 |
| TU239521 | other | downstream | 409002 | 25497715 ~ 25498919 (+) | True | G202397 |
| TU239496 | other | downstream | 409467 | 25498180 ~ 25502628 (+) | True | G202374 |
